diff cuffdiff_wrapper.xml @ 18:a85acc5199c7 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/cufflinks/cuffdiff commit 80b06e80066b32ad53ed418628992f056444256f

--- a/cuffdiff_wrapper.xml	Sat Nov 27 09:58:11 2021 +0000
+++ b/cuffdiff_wrapper.xml	Sat Oct 05 11:16:01 2024 +0000
@@ -1,4 +1,4 @@
-<tool id="cuffdiff" name="Cuffdiff" version="@VERSION@.6">
+<tool id="cuffdiff" name="Cuffdiff" version="@TOOL_VERSION@.7" profile="@PROFILE@">
     <description>find significant changes in transcript expression, splicing, and promoter use</description>
     <macros>
         <import>cuff_macros.xml</import>
@@ -262,7 +262,7 @@
     </outputs>
 
     <tests>
-        <test>
+        <test expect_num_outputs="1">
             <!--
                 cuffdiff cuffcompare_out5.gtf cuffdiff_in1.sam cuffdiff_in2.sam
             -->
@@ -287,7 +287,7 @@
             <param name="sAdditional" value="No"/>
             <output name="output_cummerbund" ftype="sqlite" file="cuffdiff_out.sqlite" compare="sim_size" />
         </test>
-        <test>
+        <test expect_num_outputs="1">
             <!--
                 Use a list collection as conditions input
                 cuffdiff cuffcompare_out5.gtf cuffdiff_in1.sam cuffdiff_in2.sam
@@ -311,7 +311,7 @@
             <param name="sAdditional" value="No"/>
             <output name="output_cummerbund" ftype="sqlite" file="cuffdiff_out.sqlite" compare="sim_size" />
         </test>
-        <test>
+        <test expect_num_outputs="11">
             <!--
                 cuffdiff cuffcompare_out5.gtf cuffdiff_in1.sam cuffdiff_in2.sam
             -->