Mercurial > repos > devteam > cuffmerge

diff cuffmerge_wrapper.xml @ 13:cf747d1bd79a draft

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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/cuffmerge commit 82ee6fc860c52c531b7a57bbb346ab1a67a434a5
author devteam
date Sun, 19 Feb 2017 12:12:38 -0500
parents 1707a530e598
children 6a6717a5f421
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--- a/cuffmerge_wrapper.xml	Tue Feb 07 18:39:42 2017 -0500
+++ b/cuffmerge_wrapper.xml	Sun Feb 19 12:12:38 2017 -0500
@@ -1,11 +1,11 @@
-<tool id="cuffmerge" name="Cuffmerge" version="@VERSION@.0">
+<tool id="cuffmerge" name="Cuffmerge" version="@VERSION@.1">
     <description>merge together several Cufflinks assemblies</description>
     <macros>
       <import>cuff_macros.xml</import>
     </macros>
     <expand macro="requirements" />
-    <expand macro="stdio" />
-    <command>
+     <version_command>cuffmerge -v</version_command>
+    <command detect_errors="aggressive">
         python '$__tool_directory__/cuffmerge_wrapper.py'
             --num-threads="\${GALAXY_SLOTS:-4}"