Mercurial > repos > devteam > data_manager_bowtie2_index_builder

diff data_manager/bowtie2_index_builder.xml @ 4:d1d5feb31804 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie2_index_builder commit 5dd2e762b5b84cec1c8344ecbeaf903e7dcc292e
author iuc
date Thu, 09 May 2019 16:15:47 -0400
parents 83da94c0e4a6
children 115f3e61b012
line wrap: on
line diff
--- a/data_manager/bowtie2_index_builder.xml	Tue Apr 04 18:06:10 2017 -0400
+++ b/data_manager/bowtie2_index_builder.xml	Thu May 09 16:15:47 2019 -0400
@@ -1,8 +1,11 @@
-<tool id="bowtie2_index_builder_data_manager" name="Bowtie2 index" tool_type="manage_data" version="2.3.0">
+<tool id="bowtie2_index_builder_data_manager" name="Bowtie2 index" tool_type="manage_data" version="@WRAPPER_VERSION@" profile="18.09">
     <description>builder</description>
     <requirements>
-        <requirement type="package" version="2.3.0">bowtie2</requirement>
+        <requirement type="package" version="@WRAPPER_VERSION@">bowtie2</requirement>
     </requirements>
+    <macros>
+        <token name="@WRAPPER_VERSION@">2.3.4.3</token>
+    </macros>
     <command detect_errors="exit_code"><![CDATA[
         python '$__tool_directory__/bowtie2_index_builder.py'
         '${out_file}'
@@ -22,6 +25,12 @@
     <outputs>
         <data name="out_file" format="data_manager_json"/>
     </outputs>
+    <tests>
+        <test>
+            <param name="all_fasta_source" value="phiX174"/>
+            <output name="out_file" value="bowtie2_data_manager.json"/>
+        </test>
+    </tests>
 
     <help>
 .. class:: infomark