comparison data_manager/data_manager_fetch_genome_all_fasta_dbkeys.py @ 7:b1bc53e9bbc5 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_genome_dbkeys_all_fasta commit 8b8103fc4277014570a021cf3090b6986d17f7ff
author iuc
date Thu, 15 Jun 2017 13:14:56 -0400
parents 60994ca04177
children 14eb0fc65c62
comparison
equal deleted inserted replaced
6:16ab4dd6a0e5 7:b1bc53e9bbc5
203 203
204 204
205 def _download_file(start, fh): 205 def _download_file(start, fh):
206 tmp = tempfile.NamedTemporaryFile() 206 tmp = tempfile.NamedTemporaryFile()
207 tmp.write(start) 207 tmp.write(start)
208 tmp.write(fh.read()) 208 while True:
209 data = fh.read(CHUNK_SIZE)
210 if data:
211 tmp.write(data)
212 else:
213 break
209 tmp.flush() 214 tmp.flush()
210 tmp.seek(0) 215 tmp.seek(0)
211 return tmp 216 return tmp
212 217
213 218