diff data_manager_conf.xml @ 10:4a82d1157b14 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_genome_dbkeys_all_fasta commit 57d05675396f0b44265fb4dbc8f9f891c6073219
author iuc
date Thu, 05 Dec 2024 06:49:22 +0000
parents c669787306ae
children
line wrap: on
line diff
--- a/data_manager_conf.xml	Thu Dec 05 17:10:39 2019 -0500
+++ b/data_manager_conf.xml	Thu Dec 05 06:49:22 2024 +0000
@@ -10,9 +10,9 @@
                 <column name="path" output_ref="out_file" >
                     <move type="file">
                         <source>${path}</source>
-                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/seq/${path}</target>
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">genomes/${dbkey}/seq/${path}</target>
                     </move>
-                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/seq/${path}</value_translation>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/genomes/${dbkey}/seq/${path}</value_translation>
                     <value_translation type="function">abspath</value_translation>
                 </column>
             </output>
@@ -24,9 +24,9 @@
                 <column name="len_path" output_ref="out_file" >
                     <move type="file">
                         <source>${len_path}</source>
-                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${value}/len/${len_path}</target>
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">genomes/${dbkey}/len/${len_path}</target>
                     </move>
-                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${value}/len/${len_path}</value_translation>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/genomes/${dbkey}/len/${len_path}</value_translation>
                     <value_translation type="function">abspath</value_translation>
                 </column>
             </output>