Mercurial > repos > devteam > data_manager_fetch_genome_dbkeys_all_fasta
view data_manager_conf.xml @ 10:4a82d1157b14 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_genome_dbkeys_all_fasta commit 57d05675396f0b44265fb4dbc8f9f891c6073219
author | iuc |
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date | Thu, 05 Dec 2024 06:49:22 +0000 |
parents | c669787306ae |
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<?xml version="1.0"?> <data_managers> <data_manager tool_file="data_manager/data_manager_fetch_genome_all_fasta_dbkeys.xml" id="fetch_genome_all_fasta_dbkeys"> <data_table name="all_fasta"> <output> <column name="value" /> <column name="dbkey" /> <column name="name" /> <column name="path" output_ref="out_file" > <move type="file"> <source>${path}</source> <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">genomes/${dbkey}/seq/${path}</target> </move> <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/genomes/${dbkey}/seq/${path}</value_translation> <value_translation type="function">abspath</value_translation> </column> </output> </data_table> <data_table name="__dbkeys__"> <output> <column name="value" /> <column name="name" /> <column name="len_path" output_ref="out_file" > <move type="file"> <source>${len_path}</source> <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">genomes/${dbkey}/len/${len_path}</target> </move> <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/genomes/${dbkey}/len/${len_path}</value_translation> <value_translation type="function">abspath</value_translation> </column> </output> </data_table> </data_manager> </data_managers>