comparison data_manager_conf.xml @ 6:6dd9e00dea95 draft default tip

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_ncbi_taxonomy/ commit 3d78021971b83d585c432830cee0488ada7bd257"

5:9de2fb1ce1fb

<?xml version="1.0"?>
<data_managers>
    <data_manager tool_file="data_manager/ncbi_taxonomy_fetcher.xml" id="ncbi_taxonomy_fetcher" version="1.0.0">
        <data_table name="ncbi_taxonomy">
            <output>
                <column name="value" />
                <column name="name" />
                <column name="path" output_ref="out_file">
                    <move type="directory" relativize_symlinks="True">
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">ncbi_taxonomy/${value}</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/ncbi_taxonomy/${value}</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
        </data_table>
    </data_manager>
</data_managers>

6:6dd9e00dea95

<?xml version="1.0"?>
<data_managers>
    <data_manager tool_file="data_manager/ncbi_taxonomy_fetcher.xml" id="ncbi_taxonomy_fetcher" version="1.0.3">
        <data_table name="ncbi_taxonomy">
            <output>
                <column name="value" />
                <column name="name" />
                <column name="path" output_ref="out_file">
                    <move type="directory" relativize_symlinks="True">
                        <source>${path}/taxonomy</source>
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">ncbi_taxonomy/${value}</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/ncbi_taxonomy/${value}</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
        </data_table>
        <data_table name="ncbi_accession2taxid">
            <output>
                <column name="value" />
                <column name="name" />
                <column name="path" output_ref="out_file">
                    <move type="directory" relativize_symlinks="True">
                        <source>${path}/accession2taxid</source>
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">ncbi_accession2taxid/${value}</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/ncbi_accession2taxid/${value}</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
        </data_table>
    </data_manager>
</data_managers>