Mercurial > repos > devteam > data_manager_hisat_index_builder
annotate data_manager_conf.xml @ 0:ba11fef120cd draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat_index_builder commit 5a7365750648c26206f05ac7956936c243c2b980
author | devteam |
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date | Sat, 13 Jun 2015 08:27:38 -0400 |
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ba11fef120cd
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat_index_builder commit 5a7365750648c26206f05ac7956936c243c2b980
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1 <?xml version="1.0"?> |
ba11fef120cd
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat_index_builder commit 5a7365750648c26206f05ac7956936c243c2b980
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2 <data_managers> |
ba11fef120cd
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat_index_builder commit 5a7365750648c26206f05ac7956936c243c2b980
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3 <data_manager tool_file="data_manager/hisat_index_builder.xml" id="hisat_index_builder" version="0.0.1"> |
ba11fef120cd
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat_index_builder commit 5a7365750648c26206f05ac7956936c243c2b980
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4 <data_table name="hisat_indexes"> |
ba11fef120cd
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat_index_builder commit 5a7365750648c26206f05ac7956936c243c2b980
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5 <output> |
ba11fef120cd
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat_index_builder commit 5a7365750648c26206f05ac7956936c243c2b980
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6 <column name="value" /> |
ba11fef120cd
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat_index_builder commit 5a7365750648c26206f05ac7956936c243c2b980
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7 <column name="dbkey" /> |
ba11fef120cd
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat_index_builder commit 5a7365750648c26206f05ac7956936c243c2b980
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8 <column name="name" /> |
ba11fef120cd
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat_index_builder commit 5a7365750648c26206f05ac7956936c243c2b980
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9 <column name="path" output_ref="out_file" > |
ba11fef120cd
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat_index_builder commit 5a7365750648c26206f05ac7956936c243c2b980
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10 <move type="directory" relativize_symlinks="True"> |
ba11fef120cd
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat_index_builder commit 5a7365750648c26206f05ac7956936c243c2b980
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11 <!-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base --> |
ba11fef120cd
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat_index_builder commit 5a7365750648c26206f05ac7956936c243c2b980
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12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/hisat_index/${value}</target> |
ba11fef120cd
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat_index_builder commit 5a7365750648c26206f05ac7956936c243c2b980
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13 </move> |
ba11fef120cd
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat_index_builder commit 5a7365750648c26206f05ac7956936c243c2b980
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14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/hisat_index/${value}/${path}</value_translation> |
ba11fef120cd
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat_index_builder commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
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15 <value_translation type="function">abspath</value_translation> |
ba11fef120cd
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat_index_builder commit 5a7365750648c26206f05ac7956936c243c2b980
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16 </column> |
ba11fef120cd
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat_index_builder commit 5a7365750648c26206f05ac7956936c243c2b980
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17 </output> |
ba11fef120cd
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat_index_builder commit 5a7365750648c26206f05ac7956936c243c2b980
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18 </data_table> |
ba11fef120cd
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat_index_builder commit 5a7365750648c26206f05ac7956936c243c2b980
devteam
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19 </data_manager> |
ba11fef120cd
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_hisat_index_builder commit 5a7365750648c26206f05ac7956936c243c2b980
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20 </data_managers> |