# HG changeset patch # User devteam # Date 1395947322 14400 # Node ID cf875cbe2df4c791cb35a8bcee475bb2646092e4 # Parent d6b6db69d9bfd730166ec6afacb73eb4b8e80708 Uploaded updated data manager that specifies samtools 0.1.19. diff -r d6b6db69d9bf -r cf875cbe2df4 data_manager/data_manager_sam_fasta_index_builder.xml --- a/data_manager/data_manager_sam_fasta_index_builder.xml Thu Mar 27 14:15:02 2014 -0400 +++ b/data_manager/data_manager_sam_fasta_index_builder.xml Thu Mar 27 15:08:42 2014 -0400 @@ -1,7 +1,7 @@ -<tool id="sam_fasta_index_builder" name="SAM FASTA index" tool_type="manage_data" version="0.0.1"> +<tool id="sam_fasta_index_builder" name="SAM FASTA index" tool_type="manage_data" version="0.0.2"> <description>builder</description> <requirements> - <requirement type="package" version="0.1.18">samtools</requirement> + <requirement type="package" version="0.1.19">samtools</requirement> </requirements> <command interpreter="python">data_manager_sam_fasta_index_builder.py "${out_file}" --fasta_filename "${all_fasta_source.fields.path}" --fasta_dbkey "${all_fasta_source.fields.dbkey}" --fasta_description "${all_fasta_source.fields.name}" --data_table_name "fasta_indexes"</command> <inputs> diff -r d6b6db69d9bf -r cf875cbe2df4 tool_dependencies.xml --- a/tool_dependencies.xml Thu Mar 27 14:15:02 2014 -0400 +++ b/tool_dependencies.xml Thu Mar 27 15:08:42 2014 -0400 @@ -1,6 +1,6 @@ <?xml version="1.0"?> <tool_dependency> - <package name="samtools" version="0.1.18"> - <repository changeset_revision="171cd8bc208d" name="package_samtools_0_1_18" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" /> + <package name="samtools" version="0.1.19"> + <repository changeset_revision="1ef76f8d8e52" name="package_samtools_0_1_19" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" /> </package> </tool_dependency>