diff data_manager_conf.xml @ 0:74b09c8e5f6e draft

planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_twobit_builder commit 130cb0c08ad3c5b858ba46b1024dcdccc3cb68c6-dirty

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager_conf.xml	Thu Jun 11 16:14:27 2015 -0400
@@ -0,0 +1,40 @@
+<?xml version="1.0"?>
+<data_managers>
+    
+    <data_manager tool_file="data_manager/twobit_builder.xml" id="twobit_builder" version="0.0.1">
+        <data_table name="lastz_seqs">
+            <output>
+                <column name="value" />
+                <column name="name" />
+                <column name="path" output_ref="out_file" >
+                    <move type="file">
+                        <source>${path}</source>
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${value}/seq/${path}</target>
+                    </move>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${value}/seq/${path}</value_translation>
+                </column>
+            </output>
+        </data_table>
+        
+        <data_table name="twobit">
+            <output>
+                <column name="value" />
+                <column name="path" output_ref="out_file" ><!-- move happens above -->
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${value}/seq/${path}</value_translation>
+                </column>
+            </output>
+        </data_table>
+        
+        <data_table name="alignseq_seq">
+            <output>
+                <column name="type" /><!-- always seq -->
+                <column name="value" /><!-- also dbkey -->
+                <column name="path" output_ref="out_file" ><!-- move happens above -->
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${value}/seq/${path}</value_translation>
+                </column>
+            </output>
+        </data_table>
+        
+    </data_manager>
+    
+</data_managers>