comparison dividePgSnpAlleles.xml @ 1:f74fdfc17143 default tip

Removed excess version attributes.

0:de839553d2a2

    #if $refcol.ref == "yes" #dividePgSnpAlleles.pl -ref=$refcol.ref_column $input1 > $out_file1
    #else #dividePgSnpAlleles.pl $input1 > $out_file1
    #end if
  </command>
  <inputs>
    <param format="interval" version="1.0.0" name="input1" type="data" label="pgSnp dataset" />
    <conditional version="1.0.0" name="refcol">
      <param version="1.0.0" name="ref" type="select" label="Dataset has a column with the reference allele:">
        <option value="yes">yes</option>
        <option value="no" selected="true">no</option>
      </param>
      <when value="yes">
      <param version="1.0.0" name="ref_column" type="data_column" data_ref="input1" label="Column with reference allele" />
      </when>
      <when value="no"> <!-- do nothing -->
      </when>
    </conditional>
  </inputs>
  <outputs>
  <data format="interval" version="1.0.0" name="out_file1" />
  </outputs>
  <tests>
    <test>
      <param name='input1' value='dividePgSnp_input.pgSnp' ftype='interval' />
      <param name='ref' value='no' />
      <output version="1.0.0" name="output" file="dividePgSnp_output.txt" />
    </test>
  </tests>

  <help>
**Dataset formats**

1:f74fdfc17143

    #if $refcol.ref == "yes" #dividePgSnpAlleles.pl -ref=$refcol.ref_column $input1 > $out_file1
    #else #dividePgSnpAlleles.pl $input1 > $out_file1
    #end if
  </command>
  <inputs>
    <param format="interval" name="input1" type="data" label="pgSnp dataset" />
    <conditional name="refcol">
      <param name="ref" type="select" label="Dataset has a column with the reference allele:">
        <option value="yes">yes</option>
        <option value="no" selected="true">no</option>
      </param>
      <when value="yes">
      <param name="ref_column" type="data_column" data_ref="input1" label="Column with reference allele" />
      </when>
      <when value="no"> <!-- do nothing -->
      </when>
    </conditional>
  </inputs>
  <outputs>
  <data format="interval" name="out_file1" />
  </outputs>
  <tests>
    <test>
      <param name='input1' value='dividePgSnp_input.pgSnp' ftype='interval' />
      <param name='ref' value='no' />
      <param name="output" file="dividePgSnp_output.txt" />
    </test>
  </tests>

  <help>
**Dataset formats**