Mercurial > repos > devteam > dwt_var_perfeature

comparison execute_dwt_var_perFeature.xml @ 3:6c29c7e347e8 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/dwt_var_perfeature commit f929353ffb0623f2218d7dec459c7da62f3b0d24"
author devteam
date Mon, 06 Jul 2020 20:34:27 -0400
parents 7a15159140d1
children
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2:7a15159140d1 3:6c29c7e347e8
1 <tool id="dwt_var1" name="Wavelet variance" version="1.0.1"> 1 <tool id="dwt_var1" name="Wavelet variance" version="1.0.2">
2 <description>using Discrete Wavelet Transfoms</description> 2 <description>using Discrete Wavelet Transfoms</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="5.26.2.1">perl</requirement>
5 <requirement type="package" version="3.4.1">r-base</requirement>
6 <requirement type="package" version="1.0_6">r-bitops</requirement> 4 <requirement type="package" version="1.0_6">r-bitops</requirement>
7 <requirement type="package" version="1.7.5">r-waveslim</requirement> 5 <requirement type="package" version="1.7.5">r-waveslim</requirement>
8 <requirement type="package" version="4.6.8">r-wavethresh</requirement> 6 <requirement type="package" version="4.6.8">r-wavethresh</requirement>
9 <requirement type="package" version="2.4_5">r-rwave</requirement>
10 </requirements> 7 </requirements>
11 <command> 8 <command detect_errors="exit_code">
12 perl '$__tool_directory__/execute_dwt_var_perFeature.pl' 9 Rscript --vanilla '$__tool_directory__/execute_dwt_var_perFeature.R'
13 '$inputFile' 10 '$inputFile'
14 $feature 11 '$feature'
15 $alpha 12 '$alpha'
16 '$outputFile1' 13 '$outputFile1'
17 '$outputFile2' 14 '$outputFile2'
18 </command> 15 </command>
19 <inputs> 16 <inputs>
20 <param format="tabular" name="inputFile" type="data" label="Select data"/> 17 <param format="tabular" name="inputFile" type="data" label="Select data"/>
21 <param name="feature" label="Feature column" type="data_column" data_ref="inputFile" multiple="true" 18 <param name="feature" label="Feature column" type="data_column" data_ref="inputFile" multiple="true"
22 help="Please select at least one column"/> 19 help="Please select at least one column"/>
23 <param name="alpha" type="float" value="0.05" label="alpha (significance level)" /> 20 <param name="alpha" type="float" value="0.05" label="alpha (significance level)" />
24 </inputs> 21 </inputs>
25 <outputs> 22 <outputs>
26 <data format="tabular" name="outputFile1"/> 23 <data format="tabular" name="outputFile1" label="${tool.name} on ${on_string}: statistics"/>
27 <data format="pdf" name="outputFile2"/> 24 <data format="pdf" name="outputFile2" label="${tool.name} on ${on_string}: pdf"/>
28 </outputs> 25 </outputs>
29 <tests> 26 <tests>
30 <test> 27 <test>
31 <param name="inputFile" value="dwt_var_in.interval"/> 28 <param name="inputFile" value="dwt_var_in.interval"/>
32 <param name="feature" value="4"/> 29 <param name="feature" value="4"/>