annotate test-data/emboss_cusp_out.cusp @ 11:1b6538ec8b56 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 9d484642914b581ce35f254466b849d3c4c2c06c
author iuc
date Thu, 23 Feb 2017 09:43:47 -0500
parents 7334f6d0ac17
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
1 #CdsCount: 10
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
2
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
3 #Coding GC 36.36%
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
4 #1st letter GC 34.22%
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
5 #2nd letter GC 35.29%
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
6 #3rd letter GC 39.57%
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
7
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
8 #Codon AA Fraction Frequency Number
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
9 GCA A 0.200 5.348 1
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
10 GCC A 0.400 10.695 2
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
11 GCG A 0.400 10.695 2
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
12 GCT A 0.000 0.000 0
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
13 TGC C 0.500 21.390 4
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
14 TGT C 0.500 21.390 4
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
15 GAC D 0.667 10.695 2
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
16 GAT D 0.333 5.348 1
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
17 GAA E 0.500 5.348 1
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
18 GAG E 0.500 5.348 1
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
19 TTC F 0.316 32.086 6
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
20 TTT F 0.684 69.519 13
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
21 GGA G 0.000 0.000 0
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
22 GGC G 0.200 5.348 1
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
23 GGG G 0.200 5.348 1
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
24 GGT G 0.600 16.043 3
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
25 CAC H 0.667 10.695 2
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
26 CAT H 0.333 5.348 1
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
27 ATA I 0.429 16.043 3
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
28 ATC I 0.143 5.348 1
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
29 ATT I 0.429 16.043 3
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
30 AAA K 0.600 32.086 6
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
31 AAG K 0.400 21.390 4
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
32 CTA L 0.152 26.738 5
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
33 CTC L 0.061 10.695 2
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
34 CTG L 0.152 26.738 5
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
35 CTT L 0.273 48.128 9
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
36 TTA L 0.182 32.086 6
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
37 TTG L 0.182 32.086 6
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
38 ATG M 1.000 16.043 3
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
39 AAC N 0.286 10.695 2
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
40 AAT N 0.714 26.738 5
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
41 CCA P 0.250 5.348 1
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
42 CCC P 0.500 10.695 2
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
43 CCG P 0.250 5.348 1
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
44 CCT P 0.000 0.000 0
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
45 CAA Q 0.333 5.348 1
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
46 CAG Q 0.667 10.695 2
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
47 AGA R 0.143 5.348 1
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
48 AGG R 0.143 5.348 1
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
49 CGA R 0.143 5.348 1
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
50 CGC R 0.000 0.000 0
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
51 CGG R 0.143 5.348 1
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
52 CGT R 0.429 16.043 3
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
53 AGC S 0.136 16.043 3
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
54 AGT S 0.227 26.738 5
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
55 TCA S 0.136 16.043 3
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
56 TCC S 0.227 26.738 5
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
57 TCG S 0.000 0.000 0
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
58 TCT S 0.273 32.086 6
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
59 ACA T 0.400 21.390 4
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
60 ACC T 0.100 5.348 1
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
61 ACG T 0.200 10.695 2
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
62 ACT T 0.300 16.043 3
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
63 GTA V 0.231 16.043 3
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
64 GTC V 0.000 0.000 0
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
65 GTG V 0.000 0.000 0
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
66 GTT V 0.769 53.476 10
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
67 TGG W 1.000 21.390 4
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
68 TAC Y 0.444 21.390 4
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
69 TAT Y 0.556 26.738 5
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
70 TAA * 0.500 26.738 5
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
71 TAG * 0.400 21.390 4
7334f6d0ac17 Uploaded emboss functional test input and output data files.
devteam
parents:
diff changeset
72 TGA * 0.100 5.348 1