Mercurial > repos > devteam > emboss_5
annotate emboss_chaos.xml @ 18:63dd26468588 draft default tip
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 18de4aa9ba00124b1b3e3afe14219e46931e58a9"
author | iuc |
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date | Fri, 09 Jul 2021 18:36:34 +0000 |
parents | 8992d258e42f |
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8992d258e42f
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 9844cae766e7471d9fa6b2e8356e5194e77f6753
iuc
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1 <tool id="EMBOSS: chaos7" name="chaos" version="@VERSION@"> |
10
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
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2 <description>Create a chaos game representation plot for a sequence</description> |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
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3 <macros> |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
parents:
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4 <import>macros.xml</import> |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
parents:
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5 </macros> |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
parents:
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6 <expand macro="requirements" /> |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
parents:
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7 <command>perl '$__tool_directory__/emboss_single_outputfile_wrapper.pl' chaos -sequence '$input1' -graph png -goutfile '$out_file1' -auto</command> |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
parents:
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8 <inputs> |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
parents:
diff
changeset
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9 <param name="input1" type="data" format="data" label="On query" /> |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
parents:
diff
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10 </inputs> |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
parents:
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11 <outputs> |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
parents:
diff
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12 <data name="out_file1" format="png" /> |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
parents:
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13 </outputs> |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
parents:
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14 <!-- <tests> |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
parents:
diff
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15 <test> |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
parents:
diff
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16 puts name of file into the png |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
parents:
diff
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17 </test> |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
parents:
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18 </tests> --> |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
parents:
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19 <help> |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
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20 You can view the original documentation here_. |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
parents:
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21 |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
parents:
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22 .. _here: http://galaxy-iuc.github.io/emboss-5.0-docs/chaos.html |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
parents:
diff
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23 </help> |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
parents:
diff
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24 <expand macro="citations" /> |
d49956b87f7e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
iuc
parents:
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25 </tool> |