Mercurial > repos > devteam > emboss_5
annotate test-data/preg.seqtable @ 18:63dd26468588 draft default tip
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 18de4aa9ba00124b1b3e3afe14219e46931e58a9"
| author | iuc | 
|---|---|
| date | Fri, 09 Jul 2021 18:36:34 +0000 | 
| parents | ce385837c160 | 
| children | 
| rev | line source | 
|---|---|
| 17 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 1 ######################################## | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 2 # Program: preg | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 3 # Rundate: Thu 19 Nov 2020 16:17:17 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 4 # Commandline: preg | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 5 # -sequence /tmp/tmpo6m2ny4d/files/f/6/0/dataset_f609b47c-0fca-4ed4-b83a-d3263a8cfb17.dat | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 6 # -outfile /tmp/tmpo6m2ny4d/files/7/0/8/dataset_7087e30b-2929-4100-b6d7-1220864626f8.dat | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 7 # -pattern "ASX?L" | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 8 # -auto | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 9 # Report_format: seqtable | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 10 # Report_file: /tmp/tmpo6m2ny4d/files/7/0/8/dataset_7087e30b-2929-4100-b6d7-1220864626f8.dat | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 11 ######################################## | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 12 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 13 #======================================= | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 14 # | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 15 # Sequence: HSFAU1_3 from: 1 to: 150 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 16 # HitCount: 1 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 17 # | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 18 # Pattern: ASX?L | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 19 # | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 20 #======================================= | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 21 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 22 Start End Pattern_name Sequence | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 23 47 49 regex1 ASL | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 24 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 25 #--------------------------------------- | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 26 #--------------------------------------- | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 27 #======================================= | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 28 # | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 29 # Sequence: HSFAU2_3 from: 1 to: 78 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 30 # HitCount: 1 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 31 # | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 32 # Pattern: ASX?L | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 33 # | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 34 #======================================= | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 35 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 36 Start End Pattern_name Sequence | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 37 47 49 regex1 ASL | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 38 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 39 #--------------------------------------- | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 40 #--------------------------------------- | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 41 #======================================= | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 42 # | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 43 # Sequence: HSFAU3_3 from: 1 to: 151 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 44 # HitCount: 1 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 45 # | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 46 # Pattern: ASX?L | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 47 # | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 48 #======================================= | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 49 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 50 Start End Pattern_name Sequence | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 51 47 49 regex1 ASL | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 52 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 53 #--------------------------------------- | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 54 #--------------------------------------- | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 55 #======================================= | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 56 # | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 57 # Sequence: HSFAU4_3 from: 1 to: 153 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 58 # HitCount: 1 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 59 # | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 60 # Pattern: ASX?L | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 61 # | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 62 #======================================= | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 63 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 64 Start End Pattern_name Sequence | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 65 48 50 regex1 ASL | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 66 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 67 #--------------------------------------- | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 68 #--------------------------------------- | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 69 #======================================= | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 70 # | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 71 # Sequence: HSFAU5_3 from: 1 to: 151 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 72 # HitCount: 1 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 73 # | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 74 # Pattern: ASX?L | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 75 # | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 76 #======================================= | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 77 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 78 Start End Pattern_name Sequence | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 79 47 49 regex1 ASL | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 80 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 81 #--------------------------------------- | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 82 #--------------------------------------- | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 83 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 84 #--------------------------------------- | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 85 # Total_sequences: 5 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 86 # Total_hitcount: 5 | 
| 
ce385837c160
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 4812c313fd8762b11f7fd002436e3a93b4c67f00"
 iuc parents: diff
changeset | 87 #--------------------------------------- | 
