Mercurial > repos > devteam > emboss_5
comparison test-data/emboss_epestfind_out.epestfind @ 1:7334f6d0ac17
Uploaded emboss functional test input and output data files.
author | devteam |
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date | Wed, 21 Mar 2012 16:30:01 -0400 |
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0:b94ca591877b | 1:7334f6d0ac17 |
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1 PEST-find: Finds PEST motifs as potential proteolytic cleavage sites. | |
2 | |
3 No PEST motif was identified in Sequence from 1 to 561. | |
4 | |
5 | |
6 ---------+---------+---------+---------+---------+---------+ | |
7 | |
8 1 GTTCGATGCCTAAAATACCTTCTTTTGTCCCTACACAGACCACAGTTTTCCTAATGGCTT 60 | |
9 | |
10 | |
11 61 TACACCGACTAGAAATTCTTGTGCAAGCACTAATTGAAAGCGGTTGGCCTAGAGTGTTAC 120 | |
12 | |
13 | |
14 121 CGGTTTGTATAGCTGAGCGCGTCTCTTGCCCTGATCAAAGGTTCATTTTCTCTACTTTGG 180 | |
15 | |
16 | |
17 181 AAGACGTTGTGGAAGAATACAACAAGTACGAGTCTCTCCCCCCTGGTTTGCTGATTACTG 240 | |
18 | |
19 | |
20 241 GATACAGTTGTAATACCCTTCGCAACACCGCGTAACTATCTATATGAATTATTTTCCCTT 300 | |
21 | |
22 | |
23 301 TATTATATGTAGTAGGTTCGTCTTTAATCTTCCTTTAGCAAGTCTTTTACTGTTTTCGAC 360 | |
24 | |
25 | |
26 361 CTCAATGTTCATGTTCTTAGGTTGTTTTGGATAATATGCGGTCAGTTTAATCTTCGTTGT 420 | |
27 | |
28 | |
29 421 TTCTTCTTAAAATATTTATTCATGGTTTAATTTTTGGTTTGTACTTGTTCAGGGGCCAGT 480 | |
30 | |
31 | |
32 481 TCATTATTTACTCTGTTTGTATACAGCAGTTCTTTTATTTTTAGTATGATTTTAATTTAA 540 | |
33 | |
34 | |
35 541 AACAATTCTAATGGTCAAAAA 561 | |
36 | |
37 | |
38 Symbols PEST motifs | |
39 +++++++ potential | |
40 OOOOOOO poor | |
41 |