Mercurial > repos > devteam > emboss_5
comparison emboss_5/emboss_cpgplot.xml @ 8:b810c96613ee draft
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/emboss_5 commit a1517c9d22029095120643bbe2c8fa53754dd2b7
| author | devteam |
|---|---|
| date | Wed, 11 Nov 2015 12:12:41 -0500 |
| parents | b94ca591877b |
| children |
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| 7:ce22ceec214a | 8:b810c96613ee |
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| 4 <command interpreter="perl">emboss_cpgplot_wrapper.pl cpgplot -sequence $input1 -window $window -minlen $minlen -minpc $minpc -outfile $outfile -graph png -goutfile $goutfile -outfeat $outfeat -minoe $minoe -auto</command> | 4 <command interpreter="perl">emboss_cpgplot_wrapper.pl cpgplot -sequence $input1 -window $window -minlen $minlen -minpc $minpc -outfile $outfile -graph png -goutfile $goutfile -outfeat $outfeat -minoe $minoe -auto</command> |
| 5 <inputs> | 5 <inputs> |
| 6 <param format="data" name="input1" type="data"> | 6 <param format="data" name="input1" type="data"> |
| 7 <label>On query</label> | 7 <label>On query</label> |
| 8 </param> | 8 </param> |
| 9 <param name="window" size="4" type="integer" value="100"> | 9 <param name="window" type="integer" value="100"> |
| 10 <label>Window Size</label> | 10 <label>Window Size</label> |
| 11 </param> | 11 </param> |
| 12 <param name="minlen" size="4" type="integer" value="200"> | 12 <param name="minlen" type="integer" value="200"> |
| 13 <label>Minimum length</label> | 13 <label>Minimum length</label> |
| 14 </param> | 14 </param> |
| 15 <param name="minoe" size="4" type="float" value="0.6"> | 15 <param name="minoe" type="float" value="0.6"> |
| 16 <label>Minimum average observed to expected ratio</label> | 16 <label>Minimum average observed to expected ratio</label> |
| 17 </param> | 17 </param> |
| 18 <param name="minpc" size="4" type="float" value="50.0"> | 18 <param name="minpc" type="float" value="50.0"> |
| 19 <label>Minimum average percentage of G plus C</label> | 19 <label>Minimum average percentage of G plus C</label> |
| 20 </param> | 20 </param> |
| 21 </inputs> | 21 </inputs> |
| 22 <outputs> | 22 <outputs> |
| 23 <data format="cpgplot" name="outfile" /> | 23 <data format="cpgplot" name="outfile" /> |