Mercurial > repos > devteam > emboss_5

diff test-data/emboss_fuzztran_out.tabular @ 1:7334f6d0ac17

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded emboss functional test input and output data files.
author devteam
date Wed, 21 Mar 2012 16:30:01 -0400
parents
children
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/emboss_fuzztran_out.tabular	Wed Mar 21 16:30:01 2012 -0400
@@ -0,0 +1,133 @@
+SeqName	Start	End	Score	Strand	Pattern_name	Mismatch	Frame	PStart	PEnd	Translation
+hg17	3958	3963	2	+	pattern1	.	1	1320	1321	AA
+hg17	3961	3966	2	+	pattern1	.	1	1321	1322	AA
+hg17	4099	4104	2	+	pattern1	.	1	1367	1368	AA
+hg17	4315	4320	2	+	pattern1	.	1	1439	1440	AA
+hg17	5194	5199	2	+	pattern1	.	1	1732	1733	AA
+hg17	8584	8589	2	+	pattern1	.	1	2862	2863	AA
+hg17	9232	9237	2	+	pattern1	.	1	3078	3079	AA
+hg17	9343	9348	2	+	pattern1	.	1	3115	3116	AA
+hg17	9715	9720	2	+	pattern1	.	1	3239	3240	AA
+hg17	9769	9774	2	+	pattern1	.	1	3257	3258	AA
+hg17	9841	9846	2	+	pattern1	.	1	3281	3282	AA
+hg17	9994	9999	2	+	pattern1	.	1	3332	3333	AA
+hg17	10045	10050	2	+	pattern1	.	1	3349	3350	AA
+hg17	10048	10053	2	+	pattern1	.	1	3350	3351	AA
+hg17	12157	12162	2	+	pattern1	.	1	4053	4054	AA
+hg17	12487	12492	2	+	pattern1	.	1	4163	4164	AA
+hg17	12688	12693	2	+	pattern1	.	1	4230	4231	AA
+hg17	12691	12696	2	+	pattern1	.	1	4231	4232	AA
+hg17	15010	15015	2	+	pattern1	.	1	5004	5005	AA
+hg17	17521	17526	2	+	pattern1	.	1	5841	5842	AA
+hg17	17551	17556	2	+	pattern1	.	1	5851	5852	AA
+hg17	1148	1153	2	+	pattern1	.	2	383	384	AA
+hg17	2078	2083	2	+	pattern1	.	2	693	694	AA
+hg17	2432	2437	2	+	pattern1	.	2	811	812	AA
+hg17	3080	3085	2	+	pattern1	.	2	1027	1028	AA
+hg17	3593	3598	2	+	pattern1	.	2	1198	1199	AA
+hg17	3692	3697	2	+	pattern1	.	2	1231	1232	AA
+hg17	4055	4060	2	+	pattern1	.	2	1352	1353	AA
+hg17	5018	5023	2	+	pattern1	.	2	1673	1674	AA
+hg17	5147	5152	2	+	pattern1	.	2	1716	1717	AA
+hg17	8276	8281	2	+	pattern1	.	2	2759	2760	AA
+hg17	9587	9592	2	+	pattern1	.	2	3196	3197	AA
+hg17	9668	9673	2	+	pattern1	.	2	3223	3224	AA
+hg17	9920	9925	2	+	pattern1	.	2	3307	3308	AA
+hg17	9971	9976	2	+	pattern1	.	2	3324	3325	AA
+hg17	10112	10117	2	+	pattern1	.	2	3371	3372	AA
+hg17	10115	10120	2	+	pattern1	.	2	3372	3373	AA
+hg17	11837	11842	2	+	pattern1	.	2	3946	3947	AA
+hg17	12026	12031	2	+	pattern1	.	2	4009	4010	AA
+hg17	12944	12949	2	+	pattern1	.	2	4315	4316	AA
+hg17	12953	12958	2	+	pattern1	.	2	4318	4319	AA
+hg17	13229	13234	2	+	pattern1	.	2	4410	4411	AA
+hg17	13232	13237	2	+	pattern1	.	2	4411	4412	AA
+hg17	15356	15361	2	+	pattern1	.	2	5119	5120	AA
+hg17	15482	15487	2	+	pattern1	.	2	5161	5162	AA
+hg17	16061	16066	2	+	pattern1	.	2	5354	5355	AA
+hg17	17822	17827	2	+	pattern1	.	2	5941	5942	AA
+hg17	15	20	2	+	pattern1	.	3	5	6	AA
+hg17	33	38	2	+	pattern1	.	3	11	12	AA
+hg17	3669	3674	2	+	pattern1	.	3	1223	1224	AA
+hg17	3759	3764	2	+	pattern1	.	3	1253	1254	AA
+hg17	5646	5651	2	+	pattern1	.	3	1882	1883	AA
+hg17	5847	5852	2	+	pattern1	.	3	1949	1950	AA
+hg17	5850	5855	2	+	pattern1	.	3	1950	1951	AA
+hg17	5853	5858	2	+	pattern1	.	3	1951	1952	AA
+hg17	7674	7679	2	+	pattern1	.	3	2558	2559	AA
+hg17	9699	9704	2	+	pattern1	.	3	3233	3234	AA
+hg17	9891	9896	2	+	pattern1	.	3	3297	3298	AA
+hg17	10074	10079	2	+	pattern1	.	3	3358	3359	AA
+hg17	10407	10412	2	+	pattern1	.	3	3469	3470	AA
+hg17	12675	12680	2	+	pattern1	.	3	4225	4226	AA
+hg17	13746	13751	2	+	pattern1	.	3	4582	4583	AA
+hg17	17115	17120	2	+	pattern1	.	3	5705	5706	AA
+hg17	17421	17426	2	+	pattern1	.	3	5807	5808	AA
+hg17	19122	19127	2	+	pattern1	.	3	6374	6375	AA
+hg17	19353	19358	2	+	pattern1	.	3	6451	6452	AA
+hg17	-2312	-2317	2	-	pattern1	.	1	772	773	AA
+hg17	-4073	-4078	2	-	pattern1	.	1	1359	1360	AA
+hg17	-4652	-4657	2	-	pattern1	.	1	1552	1553	AA
+hg17	-4778	-4783	2	-	pattern1	.	1	1594	1595	AA
+hg17	-6902	-6907	2	-	pattern1	.	1	2302	2303	AA
+hg17	-6905	-6910	2	-	pattern1	.	1	2303	2304	AA
+hg17	-7181	-7186	2	-	pattern1	.	1	2395	2396	AA
+hg17	-7190	-7195	2	-	pattern1	.	1	2398	2399	AA
+hg17	-8108	-8113	2	-	pattern1	.	1	2704	2705	AA
+hg17	-8297	-8302	2	-	pattern1	.	1	2767	2768	AA
+hg17	-10019	-10024	2	-	pattern1	.	1	3341	3342	AA
+hg17	-10022	-10027	2	-	pattern1	.	1	3342	3343	AA
+hg17	-10163	-10168	2	-	pattern1	.	1	3389	3390	AA
+hg17	-10214	-10219	2	-	pattern1	.	1	3406	3407	AA
+hg17	-10466	-10471	2	-	pattern1	.	1	3490	3491	AA
+hg17	-10547	-10552	2	-	pattern1	.	1	3517	3518	AA
+hg17	-11858	-11863	2	-	pattern1	.	1	3954	3955	AA
+hg17	-14987	-14992	2	-	pattern1	.	1	4997	4998	AA
+hg17	-15116	-15121	2	-	pattern1	.	1	5040	5041	AA
+hg17	-16079	-16084	2	-	pattern1	.	1	5361	5362	AA
+hg17	-16442	-16447	2	-	pattern1	.	1	5482	5483	AA
+hg17	-16541	-16546	2	-	pattern1	.	1	5515	5516	AA
+hg17	-17054	-17059	2	-	pattern1	.	1	5686	5687	AA
+hg17	-17702	-17707	2	-	pattern1	.	1	5902	5903	AA
+hg17	-18056	-18061	2	-	pattern1	.	1	6020	6021	AA
+hg17	-18986	-18991	2	-	pattern1	.	1	6330	6331	AA
+hg17	-783	-788	2	-	pattern1	.	2	262	263	AA
+hg17	-1014	-1019	2	-	pattern1	.	2	339	340	AA
+hg17	-2715	-2720	2	-	pattern1	.	2	906	907	AA
+hg17	-3021	-3026	2	-	pattern1	.	2	1008	1009	AA
+hg17	-6390	-6395	2	-	pattern1	.	2	2131	2132	AA
+hg17	-7461	-7466	2	-	pattern1	.	2	2488	2489	AA
+hg17	-9729	-9734	2	-	pattern1	.	2	3244	3245	AA
+hg17	-10062	-10067	2	-	pattern1	.	2	3355	3356	AA
+hg17	-10245	-10250	2	-	pattern1	.	2	3416	3417	AA
+hg17	-10437	-10442	2	-	pattern1	.	2	3480	3481	AA
+hg17	-12462	-12467	2	-	pattern1	.	2	4155	4156	AA
+hg17	-14283	-14288	2	-	pattern1	.	2	4762	4763	AA
+hg17	-14286	-14291	2	-	pattern1	.	2	4763	4764	AA
+hg17	-14289	-14294	2	-	pattern1	.	2	4764	4765	AA
+hg17	-14490	-14495	2	-	pattern1	.	2	4831	4832	AA
+hg17	-16377	-16382	2	-	pattern1	.	2	5460	5461	AA
+hg17	-16467	-16472	2	-	pattern1	.	2	5490	5491	AA
+hg17	-20103	-20108	2	-	pattern1	.	2	6702	6703	AA
+hg17	-20121	-20126	2	-	pattern1	.	2	6708	6709	AA
+hg17	17553	17548	2	-	pattern1	.	3	863	864	AA
+hg17	17523	17518	2	-	pattern1	.	3	873	874	AA
+hg17	15012	15007	2	-	pattern1	.	3	1710	1711	AA
+hg17	12693	12688	2	-	pattern1	.	3	2483	2484	AA
+hg17	12690	12685	2	-	pattern1	.	3	2484	2485	AA
+hg17	12489	12484	2	-	pattern1	.	3	2551	2552	AA
+hg17	12159	12154	2	-	pattern1	.	3	2661	2662	AA
+hg17	10050	10045	2	-	pattern1	.	3	3364	3365	AA
+hg17	10047	10042	2	-	pattern1	.	3	3365	3366	AA
+hg17	9996	9991	2	-	pattern1	.	3	3382	3383	AA
+hg17	9843	9838	2	-	pattern1	.	3	3433	3434	AA
+hg17	9771	9766	2	-	pattern1	.	3	3457	3458	AA
+hg17	9717	9712	2	-	pattern1	.	3	3475	3476	AA
+hg17	9345	9340	2	-	pattern1	.	3	3599	3600	AA
+hg17	9234	9229	2	-	pattern1	.	3	3636	3637	AA
+hg17	8586	8581	2	-	pattern1	.	3	3852	3853	AA
+hg17	5196	5191	2	-	pattern1	.	3	4982	4983	AA
+hg17	4317	4312	2	-	pattern1	.	3	5275	5276	AA
+hg17	4101	4096	2	-	pattern1	.	3	5347	5348	AA
+hg17	3963	3958	2	-	pattern1	.	3	5393	5394	AA
+hg17	3960	3955	2	-	pattern1	.	3	5394	5395	AA