diff emboss_hmoment.xml @ 10:d49956b87f7e draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
author iuc
date Wed, 08 Feb 2017 12:42:22 -0500
parents
children 8992d258e42f
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/emboss_hmoment.xml	Wed Feb 08 12:42:22 2017 -0500
@@ -0,0 +1,30 @@
+<tool id="EMBOSS: hmoment44" name="hmoment" version="5.0.0.1">
+  <description>Hydrophobic moment calculation</description>
+  <macros>
+    <import>macros.xml</import>
+  </macros>
+  <expand macro="requirements" />
+  <command>hmoment -seqall '$input1' -outfile '$out_file1' -window $window -aangle $aangle -graph png -auto</command>
+  <inputs>
+    <param name="input1" type="data" format="data" label="Sequences" />
+    <param name="window" type="integer" value="10" label="Window" />
+    <param name="aangle" type="integer" value="100" label="Alpha helix angle (degrees)" />
+  </inputs>
+  <outputs>
+    <data name="out_file1" format="hmoment" />
+  </outputs>
+    <tests>
+    <test>
+      <param name="input1" value="2.fasta"/>
+      <param name="window" value="10"/>
+      <param name="aangle" value="100"/>
+      <output name="out_file1" file="emboss_hmoment_out.hmoment"/>
+    </test>
+  </tests>
+  <help>
+    You can view the original documentation here_.
+
+    .. _here: http://galaxy-iuc.github.io/emboss-5.0-docs/hmoment.html
+  </help>
+  <expand macro="citations" />
+</tool>