Mercurial > repos > devteam > emboss_5
view test-data/emboss_epestfind_out.epestfind @ 2:a52e6cbbb469
Added tool_dependencies.xml
| author | greg <greg@bx.psu.edu> |
|---|---|
| date | Tue, 03 Jul 2012 14:46:59 -0400 |
| parents | 7334f6d0ac17 |
| children |
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PEST-find: Finds PEST motifs as potential proteolytic cleavage sites. No PEST motif was identified in Sequence from 1 to 561. ---------+---------+---------+---------+---------+---------+ 1 GTTCGATGCCTAAAATACCTTCTTTTGTCCCTACACAGACCACAGTTTTCCTAATGGCTT 60 61 TACACCGACTAGAAATTCTTGTGCAAGCACTAATTGAAAGCGGTTGGCCTAGAGTGTTAC 120 121 CGGTTTGTATAGCTGAGCGCGTCTCTTGCCCTGATCAAAGGTTCATTTTCTCTACTTTGG 180 181 AAGACGTTGTGGAAGAATACAACAAGTACGAGTCTCTCCCCCCTGGTTTGCTGATTACTG 240 241 GATACAGTTGTAATACCCTTCGCAACACCGCGTAACTATCTATATGAATTATTTTCCCTT 300 301 TATTATATGTAGTAGGTTCGTCTTTAATCTTCCTTTAGCAAGTCTTTTACTGTTTTCGAC 360 361 CTCAATGTTCATGTTCTTAGGTTGTTTTGGATAATATGCGGTCAGTTTAATCTTCGTTGT 420 421 TTCTTCTTAAAATATTTATTCATGGTTTAATTTTTGGTTTGTACTTGTTCAGGGGCCAGT 480 481 TCATTATTTACTCTGTTTGTATACAGCAGTTCTTTTATTTTTAGTATGATTTTAATTTAA 540 541 AACAATTCTAATGGTCAAAAA 561 Symbols PEST motifs +++++++ potential OOOOOOO poor