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view emboss_chips.xml @ 10:d49956b87f7e draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
author | iuc |
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date | Wed, 08 Feb 2017 12:42:22 -0500 |
parents | |
children | 8992d258e42f |
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<tool id="EMBOSS: chips10" name="chips" version="5.0.0"> <description>Codon usage statistics</description> <macros> <import>macros.xml</import> </macros> <expand macro="requirements" /> <command>chips -seqall '$input1' -outfile '$out_file1' -sum $sum -auto</command> <inputs> <param name="input1" type="data" format="data" label="On query" /> <param name="sum" type="select" label="Sum codons over all sequences"> <option value="yes">Yes</option> <option value="no">No</option> </param> </inputs> <outputs> <data name="out_file1" format="chips" /> </outputs> <tests> <test> <param name="input1" value="2.fasta"/> <param name="sum" value="yes"/> <output name="out_file1" file="emboss_chips_out.chips"/> </test> </tests> <help> You can view the original documentation here_. .. _here: http://galaxy-iuc.github.io/emboss-5.0-docs/chips.html </help> <expand macro="citations" /> </tool>