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view emboss_dreg.xml @ 10:d49956b87f7e draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit 2bfbb5ae6b801e43355fdc3f964a5111fe3fe3a1
author | iuc |
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date | Wed, 08 Feb 2017 12:42:22 -0500 |
parents | |
children | 8992d258e42f |
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<tool id="EMBOSS: dreg27" name="dreg" version="5.0.0"> <description>Regular expression search of a nucleotide sequence</description> <macros> <import>macros.xml</import> </macros> <expand macro="requirements" /> <command>dreg -sequence '$input1' -outfile '$out_file1' -pattern '$pattern' -raccshow3 "no" -rusashow3 "no" -rdesshow3 "no" -auto</command> <inputs> <param name="input1" type="data" format="data" label="Sequence 1" /> <param name="pattern" type="text" value="(AUG)" label="Regular expression pattern" /> </inputs> <outputs> <data name="out_file1" format="dreg" /> </outputs> <!-- tests not possible since dreg timestamps output file --> <help> You can view the original documentation here_. .. _here: http://galaxy-iuc.github.io/emboss-5.0-docs/dreg.html </help> <expand macro="citations" /> </tool>