Mercurial > repos > devteam > emboss_5
view emboss_pepinfo.xml @ 16:dba489bfcd62 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit d5dfff2cd58b094e0e4a6f8dc475de5facd9700b"
author | iuc |
---|---|
date | Mon, 02 Dec 2019 21:13:50 -0500 |
parents | 8992d258e42f |
children |
line wrap: on
line source
<tool id="EMBOSS: pepinfo69" name="pepinfo" version="@VERSION@.1"> <!-- puts file info in output files --> <description>Plots simple amino acid properties in parallel</description> <macros> <import>macros.xml</import> </macros> <expand macro="requirements" /> <command>perl '$__tool_directory__/emboss_single_outputfile_wrapper.pl' pepinfo -sequence '$input1' -outfile '$out_file1' -goutfile '$out_file2' -graph png -hwindow $hwindow $plot_type -auto</command> <inputs> <param name="input1" type="data" format="data" label="Sequence" /> <param name="hwindow" type="integer" value="9" label="Window size for hydropathy averaging" /> <param name="plot_type" type="select" label="Choose a plot type"> <option value="-generalplot yes -hydropathyplot no">Histogram of general properties</option> <option value="-generalplot no -hydropathyplot yes">Graphs of hydropathy</option> </param> </inputs> <outputs> <data name="out_file1" format="pepinfo" /> <data name="out_file2" format="png" /> </outputs> <help> You can view the original documentation here_. .. _here: http://galaxy-iuc.github.io/emboss-5.0-docs/pepinfo.html </help> <expand macro="citations" /> </tool>