comparison fasta_filter_by_length.xml @ 2:2fd6033d0e9c draft

planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/fasta_filter_by_length commit ad697ba869f1a81bb78168d3b81e360996fd2d52
author devteam
date Thu, 20 Jul 2017 13:49:07 -0400
parents c8cd0a03db49
children e626b3ff9922
comparison
equal deleted inserted replaced
1:c8cd0a03db49 2:2fd6033d0e9c
1 <tool id="fasta_filter_by_length" name="Filter sequences by length" version="1.1"> 1 <tool id="fasta_filter_by_length" name="Filter sequences by length" version="1.1">
2 <description></description> 2 <description></description>
3 <command interpreter="python">fasta_filter_by_length.py $input $min_length $max_length $output </command> 3 <command>
4 python $__tool_directory__/fasta_filter_by_length.py
5 '$input'
6 $min_length
7 $max_length
8 '$output'
9 </command>
4 <inputs> 10 <inputs>
5 <param name="input" type="data" format="fasta" label="Fasta file"/> 11 <param name="input" type="data" format="fasta" label="Fasta file"/>
6 <param name="min_length" type="integer" value="0" label="Minimal length" /> 12 <param name="min_length" type="integer" value="0" label="Minimal length" />
7 <param name="max_length" type="integer" value="0" label="Maximum length" help="Setting to '0' will return all sequences longer than the 'Minimal length'"/> 13 <param name="max_length" type="integer" value="0" label="Maximum length" help="Setting to '0' will return all sequences longer than the 'Minimal length'"/>
8 </inputs> 14 </inputs>
25 31
26 ----- 32 -----
27 33
28 **What it does** 34 **What it does**
29 35
30 Outputs sequences between *Minimal length* and *Maximum length*. 36 Outputs sequences greater than or equal to *Minimal length* and less than or equal to *Maximum length*.
31 37
32 ----- 38 -----
33 39
34 **Example** 40 **Example**
35 41