Mercurial > repos > devteam > fasta_filter_by_length
comparison fasta_filter_by_length.xml @ 2:2fd6033d0e9c draft
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/fasta_filter_by_length commit ad697ba869f1a81bb78168d3b81e360996fd2d52
author | devteam |
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date | Thu, 20 Jul 2017 13:49:07 -0400 |
parents | c8cd0a03db49 |
children | e626b3ff9922 |
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1:c8cd0a03db49 | 2:2fd6033d0e9c |
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1 <tool id="fasta_filter_by_length" name="Filter sequences by length" version="1.1"> | 1 <tool id="fasta_filter_by_length" name="Filter sequences by length" version="1.1"> |
2 <description></description> | 2 <description></description> |
3 <command interpreter="python">fasta_filter_by_length.py $input $min_length $max_length $output </command> | 3 <command> |
4 python $__tool_directory__/fasta_filter_by_length.py | |
5 '$input' | |
6 $min_length | |
7 $max_length | |
8 '$output' | |
9 </command> | |
4 <inputs> | 10 <inputs> |
5 <param name="input" type="data" format="fasta" label="Fasta file"/> | 11 <param name="input" type="data" format="fasta" label="Fasta file"/> |
6 <param name="min_length" type="integer" value="0" label="Minimal length" /> | 12 <param name="min_length" type="integer" value="0" label="Minimal length" /> |
7 <param name="max_length" type="integer" value="0" label="Maximum length" help="Setting to '0' will return all sequences longer than the 'Minimal length'"/> | 13 <param name="max_length" type="integer" value="0" label="Maximum length" help="Setting to '0' will return all sequences longer than the 'Minimal length'"/> |
8 </inputs> | 14 </inputs> |
25 | 31 |
26 ----- | 32 ----- |
27 | 33 |
28 **What it does** | 34 **What it does** |
29 | 35 |
30 Outputs sequences between *Minimal length* and *Maximum length*. | 36 Outputs sequences greater than or equal to *Minimal length* and less than or equal to *Maximum length*. |
31 | 37 |
32 ----- | 38 ----- |
33 | 39 |
34 **Example** | 40 **Example** |
35 | 41 |