Mercurial > repos > devteam > fastq_quality_boxplot
comparison fastq_quality_boxplot.xml @ 1:f95284aa2946
Add missing help images.
author | Dave Bouvier <dave@bx.psu.edu> |
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date | Mon, 21 Jul 2014 15:11:49 -0400 |
parents | e359ce20fbd9 |
children | 3987db70a4b0 |
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0:e359ce20fbd9 | 1:f95284aa2946 |
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31 * Whiskers show outlier at max. 1.5*IQR | 31 * Whiskers show outlier at max. 1.5*IQR |
32 | 32 |
33 | 33 |
34 An excellent quality library (median quality is 40 for almost all 36 cycles): | 34 An excellent quality library (median quality is 40 for almost all 36 cycles): |
35 | 35 |
36 .. image:: ${static_path}/fastx_icons/fastq_quality_boxplot_1.png | 36 .. image:: fastq_quality_boxplot_1.png |
37 | 37 |
38 | 38 |
39 A relatively good quality library (median quality degrades towards later cycles): | 39 A relatively good quality library (median quality degrades towards later cycles): |
40 | 40 |
41 .. image:: ${static_path}/fastx_icons/fastq_quality_boxplot_2.png | 41 .. image:: fastq_quality_boxplot_2.png |
42 | 42 |
43 A low quality library (median drops quickly): | 43 A low quality library (median drops quickly): |
44 | 44 |
45 .. image:: ${static_path}/fastx_icons/fastq_quality_boxplot_3.png | 45 .. image:: fastq_quality_boxplot_3.png |
46 | 46 |
47 ------ | 47 ------ |
48 | 48 |
49 This tool is based on `FASTX-toolkit`__ by Assaf Gordon. | 49 This tool is based on `FASTX-toolkit`__ by Assaf Gordon. |
50 | 50 |