Mercurial > repos > devteam > fastq_trimmer
changeset 6:f0b18efb97f1 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/galaxy_sequence_utils/fastq_trimmer commit bb5df9e62585e12f08dfc0a9f86eec8e205b4845
author | iuc |
---|---|
date | Fri, 04 Oct 2024 10:35:28 +0000 |
parents | b63b2bfb3ea3 |
children | |
files | fastq_trimmer.xml macros.xml |
diffstat | 2 files changed, 4 insertions(+), 2 deletions(-) [+] |
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--- a/fastq_trimmer.xml Wed Feb 19 12:35:44 2020 -0500 +++ b/fastq_trimmer.xml Fri Oct 04 10:35:28 2024 +0000 @@ -1,15 +1,15 @@ -<tool id="fastq_trimmer" name="FASTQ Trimmer" version="@TOOL_VERSION@"> +<tool id="fastq_trimmer" name="FASTQ Trimmer" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@"> <description>by column</description> <macros> <import>macros.xml</import> </macros> - <expand macro="requirements"/> <edam_topics> <edam_topic>topic_0622</edam_topic> </edam_topics> <edam_operations> <edam_operation>operation_3192</edam_operation> </edam_operations> + <expand macro="requirements"/> <command><![CDATA[ gx-fastq-trimmer '$input_file' '$output_file' ${offset_type.left_column_offset} ${offset_type.right_column_offset} ${offset_type.base_offset_type} '${input_file.extension[len('fastq'):]}' $keep_zero_length ]]></command>
--- a/macros.xml Wed Feb 19 12:35:44 2020 -0500 +++ b/macros.xml Fri Oct 04 10:35:28 2024 +0000 @@ -1,5 +1,7 @@ <macros> <token name="@TOOL_VERSION@">1.1.5</token> + <token name="@VERSION_SUFFIX@">2</token> + <token name="@PROFILE@">23.1</token> <xml name="requirements"> <requirements> <requirement type="package" version="@TOOL_VERSION@">galaxy_sequence_utils</requirement>