Mercurial > repos > devteam > fastqc
comparison test-data/fastqc_report.html @ 0:e28c965eeed4 draft
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| author | devteam |
|---|---|
| date | Mon, 27 Jan 2014 09:29:14 -0500 |
| parents | |
| children | 8fae48caaf06 |
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| 1 <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Strict//EN"> | |
| 2 <html> | |
| 3 <head><title>dataset_1.dat FastQC Report</title> | |
| 4 | |
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| 192 | |
| 193 </style> | |
| 194 | |
| 195 </head> | |
| 196 <body> | |
| 197 <div class="header"> | |
| 198 <div id="header_title"><img src="fastqc_icon.png" alt="FastQC">FastQC Report</div> | |
| 199 <div id="header_filename"> | |
| 200 Wed 16 Nov 2011<br /> | |
| 201 dataset_1.dat | |
| 202 </div> | |
| 203 </div> | |
| 204 <div class="summary"> | |
| 205 <h2>Summary</h2> | |
| 206 <ul> | |
| 207 <li><img src="tick.png" alt="[PASS]"> <a href="#M0">Basic Statistics</a></li> | |
| 208 <li><img src="warning.png" alt="[WARNING]"> <a href="#M1">Per base sequence quality</a></li> | |
| 209 <li><img src="warning.png" alt="[WARNING]"> <a href="#M2">Per sequence quality scores</a></li> | |
| 210 <li><img src="warning.png" alt="[WARNING]"> <a href="#M3">Per base sequence content</a></li> | |
| 211 <li><img src="tick.png" alt="[PASS]"> <a href="#M4">Per base GC content</a></li> | |
| 212 <li><img src="warning.png" alt="[WARNING]"> <a href="#M5">Per sequence GC content</a></li> | |
| 213 <li><img src="tick.png" alt="[PASS]"> <a href="#M6">Per base N content</a></li> | |
| 214 <li><img src="tick.png" alt="[PASS]"> <a href="#M7">Sequence Length Distribution</a></li> | |
| 215 <li><img src="tick.png" alt="[PASS]"> <a href="#M8">Sequence Duplication Levels</a></li> | |
| 216 <li><img src="warning.png" alt="[WARNING]"> <a href="#M9">Overrepresented sequences</a></li> | |
| 217 <li><img src="error.png" alt="[FAIL]"> <a href="#M10">Kmer Content</a></li> | |
| 218 </ul> | |
| 219 </div> | |
| 220 <div class="main"> | |
| 221 <div class="module"><h2 id="M0"><img src="tick.png" alt="[OK]"> Basic Statistics</h2> | |
| 222 <table> | |
| 223 <tr> | |
| 224 <th>Measure</th> | |
| 225 <th>Value</th> | |
| 226 </tr> | |
| 227 <tr> | |
| 228 <td>Filename</td> | |
| 229 <td>dataset_1.dat</td> | |
| 230 </tr> | |
| 231 <tr> | |
| 232 <td>File type</td> | |
| 233 <td>Conventional base calls</td> | |
| 234 </tr> | |
| 235 <tr> | |
| 236 <td>Encoding</td> | |
| 237 <td>Sanger / Illumina 1.9</td> | |
| 238 </tr> | |
| 239 <tr> | |
| 240 <td>Total Sequences</td> | |
| 241 <td>5000</td> | |
| 242 </tr> | |
| 243 <tr> | |
| 244 <td>Filtered Sequences</td> | |
| 245 <td>0</td> | |
| 246 </tr> | |
| 247 <tr> | |
| 248 <td>Sequence length</td> | |
| 249 <td>54</td> | |
| 250 </tr> | |
| 251 <tr> | |
| 252 <td>%GC</td> | |
| 253 <td>43</td> | |
| 254 </tr> | |
| 255 </table> | |
| 256 </div> | |
| 257 <div class="module"><h2 id="M1"><img src="warning.png" alt="[WARN]"> Per base sequence quality</h2> | |
| 258 <p><img class="indented" src="per_base_quality.png" alt="Per base quality graph"></p> | |
| 259 </div> | |
| 260 <div class="module"><h2 id="M2"><img src="warning.png" alt="[WARN]"> Per sequence quality scores</h2> | |
| 261 <p><img class="indented" src="per_sequence_quality.png" alt="Per Sequence quality graph"></p> | |
| 262 </div> | |
| 263 <div class="module"><h2 id="M3"><img src="warning.png" alt="[WARN]"> Per base sequence content</h2> | |
| 264 <p><img class="indented" src="per_base_sequence_content.png" alt="Per base sequence content"></p> | |
| 265 </div> | |
| 266 <div class="module"><h2 id="M4"><img src="tick.png" alt="[OK]"> Per base GC content</h2> | |
| 267 <p><img class="indented" src="per_base_gc_content.png" alt="Per base GC content graph"></p> | |
| 268 </div> | |
| 269 <div class="module"><h2 id="M5"><img src="warning.png" alt="[WARN]"> Per sequence GC content</h2> | |
| 270 <p><img class="indented" src="per_sequence_gc_content.png" alt="Per sequence GC content graph"></p> | |
| 271 </div> | |
| 272 <div class="module"><h2 id="M6"><img src="tick.png" alt="[OK]"> Per base N content</h2> | |
| 273 <p><img class="indented" src="per_base_n_content.png" alt="N content graph"></p> | |
| 274 </div> | |
| 275 <div class="module"><h2 id="M7"><img src="tick.png" alt="[OK]"> Sequence Length Distribution</h2> | |
| 276 <p><img class="indented" src="sequence_length_distribution.png" alt="Sequence length distribution"></p> | |
| 277 </div> | |
| 278 <div class="module"><h2 id="M8"><img src="tick.png" alt="[OK]"> Sequence Duplication Levels</h2> | |
| 279 <p><img class="indented" src="duplication_levels.png" alt="Duplication level graph"></p> | |
| 280 </div> | |
| 281 <div class="module"><h2 id="M9"><img src="warning.png" alt="[WARN]"> Overrepresented sequences</h2> | |
| 282 <table> | |
| 283 <tr> | |
| 284 <th>Sequence</th> | |
| 285 <th>Count</th> | |
| 286 <th>Percentage</th> | |
| 287 <th>Possible Source</th> | |
| 288 </tr> | |
| 289 <tr> | |
| 290 <td>CGGAAGAGCGGTTCAGCAGGAATGCCGAGATCGGAAGAGCGGTTCAGCAGGAAT</td> | |
| 291 <td>7</td> | |
| 292 <td>0.13999999999999999</td> | |
| 293 <td>Illumina Paired End PCR Primer 2 (96% over 33bp)</td> | |
| 294 </tr> | |
| 295 <tr> | |
| 296 <td>CGGTTCAGCAGGAATGCCGAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAGAC</td> | |
| 297 <td>7</td> | |
| 298 <td>0.13999999999999999</td> | |
| 299 <td>Illumina Paired End PCR Primer 2 (100% over 35bp)</td> | |
| 300 </tr> | |
| 301 </table> | |
| 302 </div> | |
| 303 <div class="module"><h2 id="M10"><img src="error.png" alt="[FAIL]"> Kmer Content</h2> | |
| 304 <p><img class="indented" src="kmer_profiles.png" alt="Kmer graph"></p> | |
| 305 <table> | |
| 306 <tr> | |
| 307 <th>Sequence</th> | |
| 308 <th>Count</th> | |
| 309 <th>Obs/Exp Overall</th> | |
| 310 <th>Obs/Exp Max</th> | |
| 311 <th>Max Obs/Exp Position</th> | |
| 312 </tr> | |
| 313 <tr> | |
| 314 <td>CCCCC</td> | |
| 315 <td>1180</td> | |
| 316 <td>9.957459</td> | |
| 317 <td>29.638031</td> | |
| 318 <td>50</td> | |
| 319 </tr> | |
| 320 <tr> | |
| 321 <td>AAAAA</td> | |
| 322 <td>2175</td> | |
| 323 <td>4.133217</td> | |
| 324 <td>7.129659</td> | |
| 325 <td>47</td> | |
| 326 </tr> | |
| 327 <tr> | |
| 328 <td>CTCCC</td> | |
| 329 <td>555</td> | |
| 330 <td>3.668942</td> | |
| 331 <td>11.56272</td> | |
| 332 <td>11</td> | |
| 333 </tr> | |
| 334 <tr> | |
| 335 <td>CCTCC</td> | |
| 336 <td>525</td> | |
| 337 <td>3.4706206</td> | |
| 338 <td>11.56272</td> | |
| 339 <td>14</td> | |
| 340 </tr> | |
| 341 <tr> | |
| 342 <td>CTGGG</td> | |
| 343 <td>465</td> | |
| 344 <td>3.0945942</td> | |
| 345 <td>8.331139</td> | |
| 346 <td>39</td> | |
| 347 </tr> | |
| 348 <tr> | |
| 349 <td>GGGGG</td> | |
| 350 <td>350</td> | |
| 351 <td>2.9865708</td> | |
| 352 <td>12.818572</td> | |
| 353 <td>41</td> | |
| 354 </tr> | |
| 355 <tr> | |
| 356 <td>TGGAA</td> | |
| 357 <td>800</td> | |
| 358 <td>2.9261596</td> | |
| 359 <td>6.397646</td> | |
| 360 <td>17</td> | |
| 361 </tr> | |
| 362 <tr> | |
| 363 <td>CCCAG</td> | |
| 364 <td>455</td> | |
| 365 <td>2.855999</td> | |
| 366 <td>9.429343</td> | |
| 367 <td>40</td> | |
| 368 </tr> | |
| 369 <tr> | |
| 370 <td>GAATG</td> | |
| 371 <td>775</td> | |
| 372 <td>2.8347175</td> | |
| 373 <td>10.053445</td> | |
| 374 <td>20</td> | |
| 375 </tr> | |
| 376 <tr> | |
| 377 <td>GTGTG</td> | |
| 378 <td>530</td> | |
| 379 <td>2.763172</td> | |
| 380 <td>7.8240557</td> | |
| 381 <td>33</td> | |
| 382 </tr> | |
| 383 <tr> | |
| 384 <td>GGGAG</td> | |
| 385 <td>435</td> | |
| 386 <td>2.7487729</td> | |
| 387 <td>6.3220544</td> | |
| 388 <td>43</td> | |
| 389 </tr> | |
| 390 <tr> | |
| 391 <td>TGTGT</td> | |
| 392 <td>670</td> | |
| 393 <td>2.7303638</td> | |
| 394 <td>6.109576</td> | |
| 395 <td>27</td> | |
| 396 </tr> | |
| 397 <tr> | |
| 398 <td>ATGGA</td> | |
| 399 <td>735</td> | |
| 400 <td>2.688409</td> | |
| 401 <td>6.397646</td> | |
| 402 <td>20</td> | |
| 403 </tr> | |
| 404 <tr> | |
| 405 <td>GGAAT</td> | |
| 406 <td>730</td> | |
| 407 <td>2.6701207</td> | |
| 408 <td>7.3115954</td> | |
| 409 <td>19</td> | |
| 410 </tr> | |
| 411 <tr> | |
| 412 <td>GCTGG</td> | |
| 413 <td>400</td> | |
| 414 <td>2.6620166</td> | |
| 415 <td>8.322799</td> | |
| 416 <td>31</td> | |
| 417 </tr> | |
| 418 <tr> | |
| 419 <td>GGAGG</td> | |
| 420 <td>420</td> | |
| 421 <td>2.6539874</td> | |
| 422 <td>7.9104857</td> | |
| 423 <td>40</td> | |
| 424 </tr> | |
| 425 <tr> | |
| 426 <td>GCAGG</td> | |
| 427 <td>405</td> | |
| 428 <td>2.5535064</td> | |
| 429 <td>14.17877</td> | |
| 430 <td>16</td> | |
| 431 </tr> | |
| 432 <tr> | |
| 433 <td>CCTGG</td> | |
| 434 <td>375</td> | |
| 435 <td>2.4900866</td> | |
| 436 <td>6.6367774</td> | |
| 437 <td>7</td> | |
| 438 </tr> | |
| 439 <tr> | |
| 440 <td>CAGCC</td> | |
| 441 <td>390</td> | |
| 442 <td>2.4479992</td> | |
| 443 <td>6.279937</td> | |
| 444 <td>38</td> | |
| 445 </tr> | |
| 446 <tr> | |
| 447 <td>GGCTG</td> | |
| 448 <td>365</td> | |
| 449 <td>2.4290898</td> | |
| 450 <td>9.97737</td> | |
| 451 <td>24</td> | |
| 452 </tr> | |
| 453 <tr> | |
| 454 <td>TGGGA</td> | |
| 455 <td>490</td> | |
| 456 <td>2.4202447</td> | |
| 457 <td>7.40506</td> | |
| 458 <td>20</td> | |
| 459 </tr> | |
| 460 <tr> | |
| 461 <td>CCAGC</td> | |
| 462 <td>385</td> | |
| 463 <td>2.4166145</td> | |
| 464 <td>6.286229</td> | |
| 465 <td>41</td> | |
| 466 </tr> | |
| 467 <tr> | |
| 468 <td>AATGG</td> | |
| 469 <td>660</td> | |
| 470 <td>2.4140818</td> | |
| 471 <td>5.4836965</td> | |
| 472 <td>18</td> | |
| 473 </tr> | |
| 474 <tr> | |
| 475 <td>GCCTG</td> | |
| 476 <td>360</td> | |
| 477 <td>2.3904827</td> | |
| 478 <td>8.295971</td> | |
| 479 <td>5</td> | |
| 480 </tr> | |
| 481 <tr> | |
| 482 <td>GCCTC</td> | |
| 483 <td>360</td> | |
| 484 <td>2.3851626</td> | |
| 485 <td>6.6286345</td> | |
| 486 <td>31</td> | |
| 487 </tr> | |
| 488 <tr> | |
| 489 <td>CCCTC</td> | |
| 490 <td>360</td> | |
| 491 <td>2.379854</td> | |
| 492 <td>8.267352</td> | |
| 493 <td>34</td> | |
| 494 </tr> | |
| 495 <tr> | |
| 496 <td>CTGTG</td> | |
| 497 <td>450</td> | |
| 498 <td>2.3408678</td> | |
| 499 <td>9.09864</td> | |
| 500 <td>44</td> | |
| 501 </tr> | |
| 502 <tr> | |
| 503 <td>GGAAG</td> | |
| 504 <td>500</td> | |
| 505 <td>2.3397229</td> | |
| 506 <td>14.031037</td> | |
| 507 <td>2</td> | |
| 508 </tr> | |
| 509 <tr> | |
| 510 <td>CAGCA</td> | |
| 511 <td>500</td> | |
| 512 <td>2.32932</td> | |
| 513 <td>10.47649</td> | |
| 514 <td>14</td> | |
| 515 </tr> | |
| 516 <tr> | |
| 517 <td>CAGGA</td> | |
| 518 <td>495</td> | |
| 519 <td>2.3111706</td> | |
| 520 <td>13.99981</td> | |
| 521 <td>17</td> | |
| 522 </tr> | |
| 523 <tr> | |
| 524 <td>TCCCA</td> | |
| 525 <td>470</td> | |
| 526 <td>2.305994</td> | |
| 527 <td>7.370469</td> | |
| 528 <td>39</td> | |
| 529 </tr> | |
| 530 <tr> | |
| 531 <td>CTGCC</td> | |
| 532 <td>345</td> | |
| 533 <td>2.285781</td> | |
| 534 <td>8.277508</td> | |
| 535 <td>10</td> | |
| 536 </tr> | |
| 537 <tr> | |
| 538 <td>GGTGG</td> | |
| 539 <td>340</td> | |
| 540 <td>2.2677608</td> | |
| 541 <td>5.009832</td> | |
| 542 <td>42</td> | |
| 543 </tr> | |
| 544 <tr> | |
| 545 <td>CCAGG</td> | |
| 546 <td>360</td> | |
| 547 <td>2.264732</td> | |
| 548 <td>6.300251</td> | |
| 549 <td>41</td> | |
| 550 </tr> | |
| 551 <tr> | |
| 552 <td>TTCCT</td> | |
| 553 <td>555</td> | |
| 554 <td>2.2516627</td> | |
| 555 <td>7.0961456</td> | |
| 556 <td>1</td> | |
| 557 </tr> | |
| 558 <tr> | |
| 559 <td>TCCCC</td> | |
| 560 <td>335</td> | |
| 561 <td>2.2145865</td> | |
| 562 <td>8.267353</td> | |
| 563 <td>29</td> | |
| 564 </tr> | |
| 565 <tr> | |
| 566 <td>CAGGC</td> | |
| 567 <td>350</td> | |
| 568 <td>2.2018228</td> | |
| 569 <td>6.300251</td> | |
| 570 <td>42</td> | |
| 571 </tr> | |
| 572 <tr> | |
| 573 <td>CTCCT</td> | |
| 574 <td>425</td> | |
| 575 <td>2.2009897</td> | |
| 576 <td>6.4701333</td> | |
| 577 <td>15</td> | |
| 578 </tr> | |
| 579 <tr> | |
| 580 <td>GGCAG</td> | |
| 581 <td>340</td> | |
| 582 <td>2.1436844</td> | |
| 583 <td>6.301676</td> | |
| 584 <td>16</td> | |
| 585 </tr> | |
| 586 <tr> | |
| 587 <td>CCCCA</td> | |
| 588 <td>340</td> | |
| 589 <td>2.129403</td> | |
| 590 <td>6.26596</td> | |
| 591 <td>31</td> | |
| 592 </tr> | |
| 593 <tr> | |
| 594 <td>CTCTG</td> | |
| 595 <td>410</td> | |
| 596 <td>2.1280441</td> | |
| 597 <td>5.1928453</td> | |
| 598 <td>48</td> | |
| 599 </tr> | |
| 600 <tr> | |
| 601 <td>TGGTG</td> | |
| 602 <td>405</td> | |
| 603 <td>2.1114805</td> | |
| 604 <td>6.520046</td> | |
| 605 <td>33</td> | |
| 606 </tr> | |
| 607 <tr> | |
| 608 <td>TTCCA</td> | |
| 609 <td>545</td> | |
| 610 <td>2.094778</td> | |
| 611 <td>6.7295837</td> | |
| 612 <td>33</td> | |
| 613 </tr> | |
| 614 <tr> | |
| 615 <td>CCCCT</td> | |
| 616 <td>315</td> | |
| 617 <td>2.0823722</td> | |
| 618 <td>6.607268</td> | |
| 619 <td>12</td> | |
| 620 </tr> | |
| 621 <tr> | |
| 622 <td>CTCAG</td> | |
| 623 <td>420</td> | |
| 624 <td>2.0652719</td> | |
| 625 <td>6.149596</td> | |
| 626 <td>46</td> | |
| 627 </tr> | |
| 628 <tr> | |
| 629 <td>AGGGA</td> | |
| 630 <td>440</td> | |
| 631 <td>2.0589561</td> | |
| 632 <td>7.0225415</td> | |
| 633 <td>31</td> | |
| 634 </tr> | |
| 635 <tr> | |
| 636 <td>CAGAG</td> | |
| 637 <td>440</td> | |
| 638 <td>2.054374</td> | |
| 639 <td>5.8390937</td> | |
| 640 <td>38</td> | |
| 641 </tr> | |
| 642 <tr> | |
| 643 <td>AGCAG</td> | |
| 644 <td>440</td> | |
| 645 <td>2.0543735</td> | |
| 646 <td>10.499857</td> | |
| 647 <td>15</td> | |
| 648 </tr> | |
| 649 <tr> | |
| 650 <td>CCCTG</td> | |
| 651 <td>310</td> | |
| 652 <td>2.05389</td> | |
| 653 <td>6.622006</td> | |
| 654 <td>24</td> | |
| 655 </tr> | |
| 656 <tr> | |
| 657 <td>CTTCC</td> | |
| 658 <td>390</td> | |
| 659 <td>2.0197318</td> | |
| 660 <td>6.4701333</td> | |
| 661 <td>17</td> | |
| 662 </tr> | |
| 663 <tr> | |
| 664 <td>AGGAA</td> | |
| 665 <td>580</td> | |
| 666 <td>2.0098667</td> | |
| 667 <td>10.390455</td> | |
| 668 <td>18</td> | |
| 669 </tr> | |
| 670 <tr> | |
| 671 <td>AGAGC</td> | |
| 672 <td>430</td> | |
| 673 <td>2.0076835</td> | |
| 674 <td>10.499858</td> | |
| 675 <td>5</td> | |
| 676 </tr> | |
| 677 <tr> | |
| 678 <td>TCTCC</td> | |
| 679 <td>385</td> | |
| 680 <td>1.9938378</td> | |
| 681 <td>5.181288</td> | |
| 682 <td>29</td> | |
| 683 </tr> | |
| 684 <tr> | |
| 685 <td>TCCTC</td> | |
| 686 <td>385</td> | |
| 687 <td>1.9938378</td> | |
| 688 <td>5.181288</td> | |
| 689 <td>48</td> | |
| 690 </tr> | |
| 691 <tr> | |
| 692 <td>TCAGC</td> | |
| 693 <td>405</td> | |
| 694 <td>1.9915122</td> | |
| 695 <td>12.286894</td> | |
| 696 <td>44</td> | |
| 697 </tr> | |
| 698 <tr> | |
| 699 <td>TGCTG</td> | |
| 700 <td>380</td> | |
| 701 <td>1.9767327</td> | |
| 702 <td>6.5055346</td> | |
| 703 <td>47</td> | |
| 704 </tr> | |
| 705 <tr> | |
| 706 <td>CACCC</td> | |
| 707 <td>315</td> | |
| 708 <td>1.9728295</td> | |
| 709 <td>6.259694</td> | |
| 710 <td>9</td> | |
| 711 </tr> | |
| 712 <tr> | |
| 713 <td>TCCTG</td> | |
| 714 <td>380</td> | |
| 715 <td>1.9723336</td> | |
| 716 <td>6.4845653</td> | |
| 717 <td>8</td> | |
| 718 </tr> | |
| 719 <tr> | |
| 720 <td>CAGGG</td> | |
| 721 <td>310</td> | |
| 722 <td>1.954536</td> | |
| 723 <td>6.3016763</td> | |
| 724 <td>21</td> | |
| 725 </tr> | |
| 726 <tr> | |
| 727 <td>GATGG</td> | |
| 728 <td>395</td> | |
| 729 <td>1.9510134</td> | |
| 730 <td>6.1708827</td> | |
| 731 <td>1</td> | |
| 732 </tr> | |
| 733 <tr> | |
| 734 <td>TGGCT</td> | |
| 735 <td>375</td> | |
| 736 <td>1.9507233</td> | |
| 737 <td>9.098641</td> | |
| 738 <td>45</td> | |
| 739 </tr> | |
| 740 <tr> | |
| 741 <td>AAGAG</td> | |
| 742 <td>560</td> | |
| 743 <td>1.9405607</td> | |
| 744 <td>9.524584</td> | |
| 745 <td>4</td> | |
| 746 </tr> | |
| 747 <tr> | |
| 748 <td>TGTGG</td> | |
| 749 <td>370</td> | |
| 750 <td>1.929007</td> | |
| 751 <td>6.5200467</td> | |
| 752 <td>30</td> | |
| 753 </tr> | |
| 754 <tr> | |
| 755 <td>CTGAG</td> | |
| 756 <td>390</td> | |
| 757 <td>1.9220302</td> | |
| 758 <td>6.163313</td> | |
| 759 <td>35</td> | |
| 760 </tr> | |
| 761 <tr> | |
| 762 <td>CCTGT</td> | |
| 763 <td>370</td> | |
| 764 <td>1.9204301</td> | |
| 765 <td>6.4845653</td> | |
| 766 <td>6</td> | |
| 767 </tr> | |
| 768 <tr> | |
| 769 <td>CAGAA</td> | |
| 770 <td>555</td> | |
| 771 <td>1.9189543</td> | |
| 772 <td>6.0476103</td> | |
| 773 <td>6</td> | |
| 774 </tr> | |
| 775 <tr> | |
| 776 <td>TCCCT</td> | |
| 777 <td>370</td> | |
| 778 <td>1.9161558</td> | |
| 779 <td>6.4766097</td> | |
| 780 <td>33</td> | |
| 781 </tr> | |
| 782 <tr> | |
| 783 <td>CCCAC</td> | |
| 784 <td>305</td> | |
| 785 <td>1.9101999</td> | |
| 786 <td>6.259694</td> | |
| 787 <td>4</td> | |
| 788 </tr> | |
| 789 <tr> | |
| 790 <td>CACCA</td> | |
| 791 <td>405</td> | |
| 792 <td>1.8825499</td> | |
| 793 <td>6.9757566</td> | |
| 794 <td>33</td> | |
| 795 </tr> | |
| 796 <tr> | |
| 797 <td>AAAGA</td> | |
| 798 <td>730</td> | |
| 799 <td>1.8732982</td> | |
| 800 <td>5.1399345</td> | |
| 801 <td>42</td> | |
| 802 </tr> | |
| 803 <tr> | |
| 804 <td>CAGTG</td> | |
| 805 <td>380</td> | |
| 806 <td>1.8727474</td> | |
| 807 <td>6.163313</td> | |
| 808 <td>30</td> | |
| 809 </tr> | |
| 810 <tr> | |
| 811 <td>GAAGA</td> | |
| 812 <td>540</td> | |
| 813 <td>1.8712552</td> | |
| 814 <td>7.792842</td> | |
| 815 <td>26</td> | |
| 816 </tr> | |
| 817 <tr> | |
| 818 <td>TCTCT</td> | |
| 819 <td>460</td> | |
| 820 <td>1.8662432</td> | |
| 821 <td>5.068676</td> | |
| 822 <td>8</td> | |
| 823 </tr> | |
| 824 <tr> | |
| 825 <td>TTTCC</td> | |
| 826 <td>460</td> | |
| 827 <td>1.8662429</td> | |
| 828 <td>5.073749</td> | |
| 829 <td>38</td> | |
| 830 </tr> | |
| 831 <tr> | |
| 832 <td>GAGGC</td> | |
| 833 <td>295</td> | |
| 834 <td>1.8599615</td> | |
| 835 <td>6.301676</td> | |
| 836 <td>22</td> | |
| 837 </tr> | |
| 838 <tr> | |
| 839 <td>TCTGT</td> | |
| 840 <td>455</td> | |
| 841 <td>1.8500755</td> | |
| 842 <td>5.0850673</td> | |
| 843 <td>49</td> | |
| 844 </tr> | |
| 845 <tr> | |
| 846 <td>CCTGC</td> | |
| 847 <td>275</td> | |
| 848 <td>1.8219992</td> | |
| 849 <td>9.93301</td> | |
| 850 <td>6</td> | |
| 851 </tr> | |
| 852 <tr> | |
| 853 <td>CCTCT</td> | |
| 854 <td>350</td> | |
| 855 <td>1.8125799</td> | |
| 856 <td>7.7641597</td> | |
| 857 <td>2</td> | |
| 858 </tr> | |
| 859 <tr> | |
| 860 <td>TGCCT</td> | |
| 861 <td>345</td> | |
| 862 <td>1.7906713</td> | |
| 863 <td>5.187652</td> | |
| 864 <td>12</td> | |
| 865 </tr> | |
| 866 <tr> | |
| 867 <td>TTCCC</td> | |
| 868 <td>345</td> | |
| 869 <td>1.7866857</td> | |
| 870 <td>6.470133</td> | |
| 871 <td>18</td> | |
| 872 </tr> | |
| 873 <tr> | |
| 874 <td>GAGGG</td> | |
| 875 <td>280</td> | |
| 876 <td>1.769325</td> | |
| 877 <td>6.3283887</td> | |
| 878 <td>41</td> | |
| 879 </tr> | |
| 880 <tr> | |
| 881 <td>CACAC</td> | |
| 882 <td>380</td> | |
| 883 <td>1.7663432</td> | |
| 884 <td>5.813131</td> | |
| 885 <td>33</td> | |
| 886 </tr> | |
| 887 <tr> | |
| 888 <td>TCTGC</td> | |
| 889 <td>340</td> | |
| 890 <td>1.7647195</td> | |
| 891 <td>5.1980486</td> | |
| 892 <td>42</td> | |
| 893 </tr> | |
| 894 <tr> | |
| 895 <td>CTGGC</td> | |
| 896 <td>265</td> | |
| 897 <td>1.7596608</td> | |
| 898 <td>6.6434207</td> | |
| 899 <td>43</td> | |
| 900 </tr> | |
| 901 <tr> | |
| 902 <td>TTCAG</td> | |
| 903 <td>455</td> | |
| 904 <td>1.7527524</td> | |
| 905 <td>9.6255</td> | |
| 906 <td>12</td> | |
| 907 </tr> | |
| 908 <tr> | |
| 909 <td>AGCCA</td> | |
| 910 <td>375</td> | |
| 911 <td>1.74699</td> | |
| 912 <td>5.8319354</td> | |
| 913 <td>39</td> | |
| 914 </tr> | |
| 915 <tr> | |
| 916 <td>CTCTC</td> | |
| 917 <td>335</td> | |
| 918 <td>1.7348979</td> | |
| 919 <td>5.1761065</td> | |
| 920 <td>3</td> | |
| 921 </tr> | |
| 922 <tr> | |
| 923 <td>GGGTG</td> | |
| 924 <td>260</td> | |
| 925 <td>1.7341703</td> | |
| 926 <td>8.333022</td> | |
| 927 <td>28</td> | |
| 928 </tr> | |
| 929 <tr> | |
| 930 <td>TGGGG</td> | |
| 931 <td>260</td> | |
| 932 <td>1.7341703</td> | |
| 933 <td>8.349721</td> | |
| 934 <td>39</td> | |
| 935 </tr> | |
| 936 <tr> | |
| 937 <td>GTGGG</td> | |
| 938 <td>255</td> | |
| 939 <td>1.7008208</td> | |
| 940 <td>6.6730905</td> | |
| 941 <td>31</td> | |
| 942 </tr> | |
| 943 <tr> | |
| 944 <td>GGCCA</td> | |
| 945 <td>270</td> | |
| 946 <td>1.698549</td> | |
| 947 <td>6.293945</td> | |
| 948 <td>43</td> | |
| 949 </tr> | |
| 950 <tr> | |
| 951 <td>GCCCC</td> | |
| 952 <td>200</td> | |
| 953 <td>1.6914694</td> | |
| 954 <td>6.3460584</td> | |
| 955 <td>32</td> | |
| 956 </tr> | |
| 957 <tr> | |
| 958 <td>CTTTG</td> | |
| 959 <td>415</td> | |
| 960 <td>1.6874313</td> | |
| 961 <td>5.0799813</td> | |
| 962 <td>2</td> | |
| 963 </tr> | |
| 964 <tr> | |
| 965 <td>ACACA</td> | |
| 966 <td>485</td> | |
| 967 <td>1.6731915</td> | |
| 968 <td>5.1721287</td> | |
| 969 <td>14</td> | |
| 970 </tr> | |
| 971 <tr> | |
| 972 <td>GTGGT</td> | |
| 973 <td>320</td> | |
| 974 <td>1.6683302</td> | |
| 975 <td>5.216037</td> | |
| 976 <td>31</td> | |
| 977 </tr> | |
| 978 <tr> | |
| 979 <td>CTCAC</td> | |
| 980 <td>340</td> | |
| 981 <td>1.6681659</td> | |
| 982 <td>7.363092</td> | |
| 983 <td>31</td> | |
| 984 </tr> | |
| 985 <tr> | |
| 986 <td>TGCTT</td> | |
| 987 <td>410</td> | |
| 988 <td>1.6671008</td> | |
| 989 <td>5.090162</td> | |
| 990 <td>40</td> | |
| 991 </tr> | |
| 992 <tr> | |
| 993 <td>GGGGC</td> | |
| 994 <td>195</td> | |
| 995 <td>1.6602434</td> | |
| 996 <td>8.526694</td> | |
| 997 <td>40</td> | |
| 998 </tr> | |
| 999 <tr> | |
| 1000 <td>AGTGG</td> | |
| 1001 <td>335</td> | |
| 1002 <td>1.654657</td> | |
| 1003 <td>6.1708827</td> | |
| 1004 <td>3</td> | |
| 1005 </tr> | |
| 1006 <tr> | |
| 1007 <td>TTCTG</td> | |
| 1008 <td>405</td> | |
| 1009 <td>1.6467704</td> | |
| 1010 <td>5.0850663</td> | |
| 1011 <td>49</td> | |
| 1012 </tr> | |
| 1013 <tr> | |
| 1014 <td>AGAAG</td> | |
| 1015 <td>475</td> | |
| 1016 <td>1.6460115</td> | |
| 1017 <td>5.1952276</td> | |
| 1018 <td>22</td> | |
| 1019 </tr> | |
| 1020 <tr> | |
| 1021 <td>ACTCC</td> | |
| 1022 <td>335</td> | |
| 1023 <td>1.6436341</td> | |
| 1024 <td>6.1297736</td> | |
| 1025 <td>10</td> | |
| 1026 </tr> | |
| 1027 <tr> | |
| 1028 <td>GGCTC</td> | |
| 1029 <td>245</td> | |
| 1030 <td>1.6268562</td> | |
| 1031 <td>8.304275</td> | |
| 1032 <td>46</td> | |
| 1033 </tr> | |
| 1034 <tr> | |
| 1035 <td>TGGCA</td> | |
| 1036 <td>330</td> | |
| 1037 <td>1.6263331</td> | |
| 1038 <td>8.637284</td> | |
| 1039 <td>40</td> | |
| 1040 </tr> | |
| 1041 <tr> | |
| 1042 <td>TCCTT</td> | |
| 1043 <td>400</td> | |
| 1044 <td>1.6228201</td> | |
| 1045 <td>6.0946</td> | |
| 1046 <td>40</td> | |
| 1047 </tr> | |
| 1048 <tr> | |
| 1049 <td>TCTGG</td> | |
| 1050 <td>310</td> | |
| 1051 <td>1.612598</td> | |
| 1052 <td>5.204428</td> | |
| 1053 <td>43</td> | |
| 1054 </tr> | |
| 1055 <tr> | |
| 1056 <td>GGGGA</td> | |
| 1057 <td>255</td> | |
| 1058 <td>1.6113497</td> | |
| 1059 <td>6.3157325</td> | |
| 1060 <td>7</td> | |
| 1061 </tr> | |
| 1062 <tr> | |
| 1063 <td>CTGCT</td> | |
| 1064 <td>310</td> | |
| 1065 <td>1.609009</td> | |
| 1066 <td>6.4845653</td> | |
| 1067 <td>3</td> | |
| 1068 </tr> | |
| 1069 <tr> | |
| 1070 <td>CCCAA</td> | |
| 1071 <td>345</td> | |
| 1072 <td>1.6036536</td> | |
| 1073 <td>5.8073177</td> | |
| 1074 <td>10</td> | |
| 1075 </tr> | |
| 1076 <tr> | |
| 1077 <td>TGGCC</td> | |
| 1078 <td>240</td> | |
| 1079 <td>1.5936551</td> | |
| 1080 <td>6.6434207</td> | |
| 1081 <td>49</td> | |
| 1082 </tr> | |
| 1083 <tr> | |
| 1084 <td>GTGCT</td> | |
| 1085 <td>305</td> | |
| 1086 <td>1.5865883</td> | |
| 1087 <td>5.220104</td> | |
| 1088 <td>50</td> | |
| 1089 </tr> | |
| 1090 <tr> | |
| 1091 <td>GCTTT</td> | |
| 1092 <td>390</td> | |
| 1093 <td>1.5857788</td> | |
| 1094 <td>6.1081944</td> | |
| 1095 <td>41</td> | |
| 1096 </tr> | |
| 1097 <tr> | |
| 1098 <td>CCACA</td> | |
| 1099 <td>335</td> | |
| 1100 <td>1.5571709</td> | |
| 1101 <td>5.813131</td> | |
| 1102 <td>30</td> | |
| 1103 </tr> | |
| 1104 <tr> | |
| 1105 <td>CCTTC</td> | |
| 1106 <td>300</td> | |
| 1107 <td>1.5536399</td> | |
| 1108 <td>6.4701333</td> | |
| 1109 <td>17</td> | |
| 1110 </tr> | |
| 1111 <tr> | |
| 1112 <td>CCACT</td> | |
| 1113 <td>315</td> | |
| 1114 <td>1.5455065</td> | |
| 1115 <td>6.135909</td> | |
| 1116 <td>32</td> | |
| 1117 </tr> | |
| 1118 <tr> | |
| 1119 <td>TCTTC</td> | |
| 1120 <td>380</td> | |
| 1121 <td>1.5416791</td> | |
| 1122 <td>5.0737495</td> | |
| 1123 <td>49</td> | |
| 1124 </tr> | |
| 1125 <tr> | |
| 1126 <td>GTTCA</td> | |
| 1127 <td>400</td> | |
| 1128 <td>1.5408814</td> | |
| 1129 <td>7.700401</td> | |
| 1130 <td>11</td> | |
| 1131 </tr> | |
| 1132 <tr> | |
| 1133 <td>AGGCA</td> | |
| 1134 <td>330</td> | |
| 1135 <td>1.5407803</td> | |
| 1136 <td>5.8332543</td> | |
| 1137 <td>6</td> | |
| 1138 </tr> | |
| 1139 <tr> | |
| 1140 <td>AAAAG</td> | |
| 1141 <td>600</td> | |
| 1142 <td>1.5396972</td> | |
| 1143 <td>5.782427</td> | |
| 1144 <td>41</td> | |
| 1145 </tr> | |
| 1146 <tr> | |
| 1147 <td>GCACA</td> | |
| 1148 <td>330</td> | |
| 1149 <td>1.5373511</td> | |
| 1150 <td>5.8202715</td> | |
| 1151 <td>18</td> | |
| 1152 </tr> | |
| 1153 <tr> | |
| 1154 <td>ATGCC</td> | |
| 1155 <td>305</td> | |
| 1156 <td>1.4997808</td> | |
| 1157 <td>12.286893</td> | |
| 1158 <td>22</td> | |
| 1159 </tr> | |
| 1160 <tr> | |
| 1161 <td>GAAGG</td> | |
| 1162 <td>320</td> | |
| 1163 <td>1.4974226</td> | |
| 1164 <td>5.8462653</td> | |
| 1165 <td>8</td> | |
| 1166 </tr> | |
| 1167 <tr> | |
| 1168 <td>GAGAG</td> | |
| 1169 <td>320</td> | |
| 1170 <td>1.4974226</td> | |
| 1171 <td>5.857981</td> | |
| 1172 <td>41</td> | |
| 1173 </tr> | |
| 1174 <tr> | |
| 1175 <td>TGTGC</td> | |
| 1176 <td>285</td> | |
| 1177 <td>1.4825499</td> | |
| 1178 <td>5.2044287</td> | |
| 1179 <td>29</td> | |
| 1180 </tr> | |
| 1181 <tr> | |
| 1182 <td>TTGGC</td> | |
| 1183 <td>285</td> | |
| 1184 <td>1.4825495</td> | |
| 1185 <td>5.199223</td> | |
| 1186 <td>15</td> | |
| 1187 </tr> | |
| 1188 <tr> | |
| 1189 <td>GGGAT</td> | |
| 1190 <td>300</td> | |
| 1191 <td>1.4817826</td> | |
| 1192 <td>7.40506</td> | |
| 1193 <td>21</td> | |
| 1194 </tr> | |
| 1195 <tr> | |
| 1196 <td>AGCTG</td> | |
| 1197 <td>300</td> | |
| 1198 <td>1.4784846</td> | |
| 1199 <td>6.1633124</td> | |
| 1200 <td>30</td> | |
| 1201 </tr> | |
| 1202 <tr> | |
| 1203 <td>AACAG</td> | |
| 1204 <td>425</td> | |
| 1205 <td>1.4694693</td> | |
| 1206 <td>5.1836653</td> | |
| 1207 <td>10</td> | |
| 1208 </tr> | |
| 1209 <tr> | |
| 1210 <td>GAGTG</td> | |
| 1211 <td>295</td> | |
| 1212 <td>1.4570862</td> | |
| 1213 <td>6.1770606</td> | |
| 1214 <td>33</td> | |
| 1215 </tr> | |
| 1216 <tr> | |
| 1217 <td>GGGAC</td> | |
| 1218 <td>230</td> | |
| 1219 <td>1.4501395</td> | |
| 1220 <td>6.3143044</td> | |
| 1221 <td>40</td> | |
| 1222 </tr> | |
| 1223 <tr> | |
| 1224 <td>GTGTT</td> | |
| 1225 <td>355</td> | |
| 1226 <td>1.4466851</td> | |
| 1227 <td>6.134112</td> | |
| 1228 <td>50</td> | |
| 1229 </tr> | |
| 1230 <tr> | |
| 1231 <td>TTTGG</td> | |
| 1232 <td>355</td> | |
| 1233 <td>1.4466851</td> | |
| 1234 <td>6.1095753</td> | |
| 1235 <td>3</td> | |
| 1236 </tr> | |
| 1237 <tr> | |
| 1238 <td>TCTTT</td> | |
| 1239 <td>455</td> | |
| 1240 <td>1.4461157</td> | |
| 1241 <td>5.5590916</td> | |
| 1242 <td>1</td> | |
| 1243 </tr> | |
| 1244 <tr> | |
| 1245 <td>GAGAT</td> | |
| 1246 <td>395</td> | |
| 1247 <td>1.4447913</td> | |
| 1248 <td>6.397646</td> | |
| 1249 <td>27</td> | |
| 1250 </tr> | |
| 1251 <tr> | |
| 1252 <td>CAAAA</td> | |
| 1253 <td>560</td> | |
| 1254 <td>1.4338523</td> | |
| 1255 <td>5.123362</td> | |
| 1256 <td>31</td> | |
| 1257 </tr> | |
| 1258 <tr> | |
| 1259 <td>GGTTC</td> | |
| 1260 <td>275</td> | |
| 1261 <td>1.4305303</td> | |
| 1262 <td>10.398446</td> | |
| 1263 <td>10</td> | |
| 1264 </tr> | |
| 1265 <tr> | |
| 1266 <td>CCCTT</td> | |
| 1267 <td>275</td> | |
| 1268 <td>1.4241698</td> | |
| 1269 <td>5.186479</td> | |
| 1270 <td>39</td> | |
| 1271 </tr> | |
| 1272 <tr> | |
| 1273 <td>CTGTT</td> | |
| 1274 <td>350</td> | |
| 1275 <td>1.4231348</td> | |
| 1276 <td>5.0799813</td> | |
| 1277 <td>10</td> | |
| 1278 </tr> | |
| 1279 <tr> | |
| 1280 <td>ATGGT</td> | |
| 1281 <td>365</td> | |
| 1282 <td>1.4091904</td> | |
| 1283 <td>6.7596393</td> | |
| 1284 <td>47</td> | |
| 1285 </tr> | |
| 1286 <tr> | |
| 1287 <td>TGTTG</td> | |
| 1288 <td>345</td> | |
| 1289 <td>1.4059336</td> | |
| 1290 <td>5.1015162</td> | |
| 1291 <td>40</td> | |
| 1292 </tr> | |
| 1293 <tr> | |
| 1294 <td>CTGTC</td> | |
| 1295 <td>270</td> | |
| 1296 <td>1.4013947</td> | |
| 1297 <td>5.198048</td> | |
| 1298 <td>39</td> | |
| 1299 </tr> | |
| 1300 <tr> | |
| 1301 <td>GAGAC</td> | |
| 1302 <td>300</td> | |
| 1303 <td>1.4007094</td> | |
| 1304 <td>5.856681</td> | |
| 1305 <td>50</td> | |
| 1306 </tr> | |
| 1307 <tr> | |
| 1308 <td>CTTCT</td> | |
| 1309 <td>345</td> | |
| 1310 <td>1.3996824</td> | |
| 1311 <td>7.1246448</td> | |
| 1312 <td>50</td> | |
| 1313 </tr> | |
| 1314 <tr> | |
| 1315 <td>GGCCC</td> | |
| 1316 <td>165</td> | |
| 1317 <td>1.398575</td> | |
| 1318 <td>6.353853</td> | |
| 1319 <td>2</td> | |
| 1320 </tr> | |
| 1321 <tr> | |
| 1322 <td>TGAGT</td> | |
| 1323 <td>360</td> | |
| 1324 <td>1.3898867</td> | |
| 1325 <td>5.7939773</td> | |
| 1326 <td>32</td> | |
| 1327 </tr> | |
| 1328 <tr> | |
| 1329 <td>GGCAC</td> | |
| 1330 <td>220</td> | |
| 1331 <td>1.3840029</td> | |
| 1332 <td>6.2876506</td> | |
| 1333 <td>17</td> | |
| 1334 </tr> | |
| 1335 <tr> | |
| 1336 <td>CCTTT</td> | |
| 1337 <td>340</td> | |
| 1338 <td>1.3793972</td> | |
| 1339 <td>5.068676</td> | |
| 1340 <td>8</td> | |
| 1341 </tr> | |
| 1342 <tr> | |
| 1343 <td>CCTTG</td> | |
| 1344 <td>265</td> | |
| 1345 <td>1.3754432</td> | |
| 1346 <td>5.187652</td> | |
| 1347 <td>18</td> | |
| 1348 </tr> | |
| 1349 <tr> | |
| 1350 <td>TTGAA</td> | |
| 1351 <td>475</td> | |
| 1352 <td>1.3580486</td> | |
| 1353 <td>6.4295163</td> | |
| 1354 <td>7</td> | |
| 1355 </tr> | |
| 1356 <tr> | |
| 1357 <td>GAGCG</td> | |
| 1358 <td>215</td> | |
| 1359 <td>1.3555653</td> | |
| 1360 <td>12.603353</td> | |
| 1361 <td>6</td> | |
| 1362 </tr> | |
| 1363 <tr> | |
| 1364 <td>AAGGA</td> | |
| 1365 <td>390</td> | |
| 1366 <td>1.3514621</td> | |
| 1367 <td>5.1952276</td> | |
| 1368 <td>44</td> | |
| 1369 </tr> | |
| 1370 <tr> | |
| 1371 <td>TTCTT</td> | |
| 1372 <td>420</td> | |
| 1373 <td>1.3348758</td> | |
| 1374 <td>7.941558</td> | |
| 1375 <td>4</td> | |
| 1376 </tr> | |
| 1377 <tr> | |
| 1378 <td>GGGGT</td> | |
| 1379 <td>200</td> | |
| 1380 <td>1.3339773</td> | |
| 1381 <td>8.333022</td> | |
| 1382 <td>45</td> | |
| 1383 </tr> | |
| 1384 <tr> | |
| 1385 <td>CAGAT</td> | |
| 1386 <td>365</td> | |
| 1387 <td>1.3320893</td> | |
| 1388 <td>5.4769697</td> | |
| 1389 <td>34</td> | |
| 1390 </tr> | |
| 1391 <tr> | |
| 1392 <td>CTTGG</td> | |
| 1393 <td>255</td> | |
| 1394 <td>1.3264918</td> | |
| 1395 <td>5.1992235</td> | |
| 1396 <td>18</td> | |
| 1397 </tr> | |
| 1398 <tr> | |
| 1399 <td>TGGTT</td> | |
| 1400 <td>320</td> | |
| 1401 <td>1.3040541</td> | |
| 1402 <td>5.091313</td> | |
| 1403 <td>25</td> | |
| 1404 </tr> | |
| 1405 <tr> | |
| 1406 <td>TTGGG</td> | |
| 1407 <td>250</td> | |
| 1408 <td>1.3033829</td> | |
| 1409 <td>6.5135255</td> | |
| 1410 <td>6</td> | |
| 1411 </tr> | |
| 1412 <tr> | |
| 1413 <td>CTGGT</td> | |
| 1414 <td>250</td> | |
| 1415 <td>1.3004823</td> | |
| 1416 <td>5.204428</td> | |
| 1417 <td>48</td> | |
| 1418 </tr> | |
| 1419 <tr> | |
| 1420 <td>GCTCC</td> | |
| 1421 <td>195</td> | |
| 1422 <td>1.2919631</td> | |
| 1423 <td>8.277508</td> | |
| 1424 <td>26</td> | |
| 1425 </tr> | |
| 1426 <tr> | |
| 1427 <td>TGATG</td> | |
| 1428 <td>330</td> | |
| 1429 <td>1.2740628</td> | |
| 1430 <td>5.7939773</td> | |
| 1431 <td>46</td> | |
| 1432 </tr> | |
| 1433 <tr> | |
| 1434 <td>TGTCC</td> | |
| 1435 <td>245</td> | |
| 1436 <td>1.2716361</td> | |
| 1437 <td>5.187652</td> | |
| 1438 <td>21</td> | |
| 1439 </tr> | |
| 1440 <tr> | |
| 1441 <td>GGCTT</td> | |
| 1442 <td>240</td> | |
| 1443 <td>1.2484628</td> | |
| 1444 <td>5.199223</td> | |
| 1445 <td>4</td> | |
| 1446 </tr> | |
| 1447 <tr> | |
| 1448 <td>GACAG</td> | |
| 1449 <td>265</td> | |
| 1450 <td>1.2372932</td> | |
| 1451 <td>5.833254</td> | |
| 1452 <td>27</td> | |
| 1453 </tr> | |
| 1454 <tr> | |
| 1455 <td>GGTGT</td> | |
| 1456 <td>235</td> | |
| 1457 <td>1.2251799</td> | |
| 1458 <td>5.21082</td> | |
| 1459 <td>27</td> | |
| 1460 </tr> | |
| 1461 <tr> | |
| 1462 <td>AATGC</td> | |
| 1463 <td>335</td> | |
| 1464 <td>1.2226022</td> | |
| 1465 <td>10.031068</td> | |
| 1466 <td>21</td> | |
| 1467 </tr> | |
| 1468 <tr> | |
| 1469 <td>TTTGC</td> | |
| 1470 <td>300</td> | |
| 1471 <td>1.2198299</td> | |
| 1472 <td>5.0799813</td> | |
| 1473 <td>9</td> | |
| 1474 </tr> | |
| 1475 <tr> | |
| 1476 <td>GTCCT</td> | |
| 1477 <td>230</td> | |
| 1478 <td>1.1937809</td> | |
| 1479 <td>5.1928453</td> | |
| 1480 <td>47</td> | |
| 1481 </tr> | |
| 1482 <tr> | |
| 1483 <td>GGGCC</td> | |
| 1484 <td>140</td> | |
| 1485 <td>1.1893166</td> | |
| 1486 <td>6.3744006</td> | |
| 1487 <td>43</td> | |
| 1488 </tr> | |
| 1489 <tr> | |
| 1490 <td>ATCCC</td> | |
| 1491 <td>240</td> | |
| 1492 <td>1.1775287</td> | |
| 1493 <td>6.135909</td> | |
| 1494 <td>43</td> | |
| 1495 </tr> | |
| 1496 <tr> | |
| 1497 <td>GCTCT</td> | |
| 1498 <td>225</td> | |
| 1499 <td>1.1678292</td> | |
| 1500 <td>7.789268</td> | |
| 1501 <td>47</td> | |
| 1502 </tr> | |
| 1503 <tr> | |
| 1504 <td>AGCCC</td> | |
| 1505 <td>185</td> | |
| 1506 <td>1.1612303</td> | |
| 1507 <td>6.2799363</td> | |
| 1508 <td>31</td> | |
| 1509 </tr> | |
| 1510 <tr> | |
| 1511 <td>GATCG</td> | |
| 1512 <td>235</td> | |
| 1513 <td>1.1581463</td> | |
| 1514 <td>6.1633124</td> | |
| 1515 <td>29</td> | |
| 1516 </tr> | |
| 1517 <tr> | |
| 1518 <td>ACCCT</td> | |
| 1519 <td>230</td> | |
| 1520 <td>1.128465</td> | |
| 1521 <td>6.129773</td> | |
| 1522 <td>10</td> | |
| 1523 </tr> | |
| 1524 <tr> | |
| 1525 <td>GTTGG</td> | |
| 1526 <td>215</td> | |
| 1527 <td>1.1209095</td> | |
| 1528 <td>5.2160373</td> | |
| 1529 <td>47</td> | |
| 1530 </tr> | |
| 1531 <tr> | |
| 1532 <td>AGCTC</td> | |
| 1533 <td>225</td> | |
| 1534 <td>1.1063956</td> | |
| 1535 <td>6.1434464</td> | |
| 1536 <td>25</td> | |
| 1537 </tr> | |
| 1538 <tr> | |
| 1539 <td>CCCAT</td> | |
| 1540 <td>225</td> | |
| 1541 <td>1.1039332</td> | |
| 1542 <td>6.129773</td> | |
| 1543 <td>21</td> | |
| 1544 </tr> | |
| 1545 <tr> | |
| 1546 <td>CGGAA</td> | |
| 1547 <td>235</td> | |
| 1548 <td>1.0972222</td> | |
| 1549 <td>9.333206</td> | |
| 1550 <td>1</td> | |
| 1551 </tr> | |
| 1552 <tr> | |
| 1553 <td>TCTTG</td> | |
| 1554 <td>265</td> | |
| 1555 <td>1.0775164</td> | |
| 1556 <td>5.0799813</td> | |
| 1557 <td>21</td> | |
| 1558 </tr> | |
| 1559 <tr> | |
| 1560 <td>ATGCA</td> | |
| 1561 <td>295</td> | |
| 1562 <td>1.0766199</td> | |
| 1563 <td>5.4714913</td> | |
| 1564 <td>37</td> | |
| 1565 </tr> | |
| 1566 <tr> | |
| 1567 <td>GCTTG</td> | |
| 1568 <td>205</td> | |
| 1569 <td>1.0663953</td> | |
| 1570 <td>5.199223</td> | |
| 1571 <td>2</td> | |
| 1572 </tr> | |
| 1573 <tr> | |
| 1574 <td>AGCGG</td> | |
| 1575 <td>165</td> | |
| 1576 <td>1.0403174</td> | |
| 1577 <td>12.603352</td> | |
| 1578 <td>7</td> | |
| 1579 </tr> | |
| 1580 <tr> | |
| 1581 <td>TTGCC</td> | |
| 1582 <td>200</td> | |
| 1583 <td>1.0380702</td> | |
| 1584 <td>5.1876516</td> | |
| 1585 <td>3</td> | |
| 1586 </tr> | |
| 1587 <tr> | |
| 1588 <td>AACCT</td> | |
| 1589 <td>285</td> | |
| 1590 <td>1.0378094</td> | |
| 1591 <td>5.4593143</td> | |
| 1592 <td>13</td> | |
| 1593 </tr> | |
| 1594 <tr> | |
| 1595 <td>AACCA</td> | |
| 1596 <td>300</td> | |
| 1597 <td>1.0349638</td> | |
| 1598 <td>5.1721287</td> | |
| 1599 <td>22</td> | |
| 1600 </tr> | |
| 1601 <tr> | |
| 1602 <td>CCGAG</td> | |
| 1603 <td>160</td> | |
| 1604 <td>1.0065476</td> | |
| 1605 <td>12.575301</td> | |
| 1606 <td>25</td> | |
| 1607 </tr> | |
| 1608 <tr> | |
| 1609 <td>GTTCC</td> | |
| 1610 <td>190</td> | |
| 1611 <td>0.9861668</td> | |
| 1612 <td>6.4845653</td> | |
| 1613 <td>27</td> | |
| 1614 </tr> | |
| 1615 <tr> | |
| 1616 <td>ACTCA</td> | |
| 1617 <td>270</td> | |
| 1618 <td>0.983188</td> | |
| 1619 <td>5.4593153</td> | |
| 1620 <td>11</td> | |
| 1621 </tr> | |
| 1622 <tr> | |
| 1623 <td>CTCAT</td> | |
| 1624 <td>255</td> | |
| 1625 <td>0.9801258</td> | |
| 1626 <td>5.7624474</td> | |
| 1627 <td>4</td> | |
| 1628 </tr> | |
| 1629 <tr> | |
| 1630 <td>GAACC</td> | |
| 1631 <td>210</td> | |
| 1632 <td>0.9783144</td> | |
| 1633 <td>5.820272</td> | |
| 1634 <td>25</td> | |
| 1635 </tr> | |
| 1636 <tr> | |
| 1637 <td>GGCGG</td> | |
| 1638 <td>110</td> | |
| 1639 <td>0.93654746</td> | |
| 1640 <td>10.637051</td> | |
| 1641 <td>44</td> | |
| 1642 </tr> | |
| 1643 <tr> | |
| 1644 <td>GCGGG</td> | |
| 1645 <td>110</td> | |
| 1646 <td>0.93654746</td> | |
| 1647 <td>6.3886194</td> | |
| 1648 <td>36</td> | |
| 1649 </tr> | |
| 1650 <tr> | |
| 1651 <td>ATCGG</td> | |
| 1652 <td>190</td> | |
| 1653 <td>0.93637353</td> | |
| 1654 <td>6.163312</td> | |
| 1655 <td>30</td> | |
| 1656 </tr> | |
| 1657 <tr> | |
| 1658 <td>GTCTG</td> | |
| 1659 <td>180</td> | |
| 1660 <td>0.9363471</td> | |
| 1661 <td>5.2096424</td> | |
| 1662 <td>41</td> | |
| 1663 </tr> | |
| 1664 <tr> | |
| 1665 <td>GCGGT</td> | |
| 1666 <td>140</td> | |
| 1667 <td>0.93170583</td> | |
| 1668 <td>13.303162</td> | |
| 1669 <td>8</td> | |
| 1670 </tr> | |
| 1671 <tr> | |
| 1672 <td>CGGGG</td> | |
| 1673 <td>105</td> | |
| 1674 <td>0.8939771</td> | |
| 1675 <td>6.3886194</td> | |
| 1676 <td>46</td> | |
| 1677 </tr> | |
| 1678 <tr> | |
| 1679 <td>GGGCG</td> | |
| 1680 <td>105</td> | |
| 1681 <td>0.8939771</td> | |
| 1682 <td>8.518159</td> | |
| 1683 <td>43</td> | |
| 1684 </tr> | |
| 1685 <tr> | |
| 1686 <td>TCGGA</td> | |
| 1687 <td>170</td> | |
| 1688 <td>0.83780795</td> | |
| 1689 <td>7.395975</td> | |
| 1690 <td>31</td> | |
| 1691 </tr> | |
| 1692 <tr> | |
| 1693 <td>CTTGT</td> | |
| 1694 <td>205</td> | |
| 1695 <td>0.83355045</td> | |
| 1696 <td>5.0850673</td> | |
| 1697 <td>38</td> | |
| 1698 </tr> | |
| 1699 <tr> | |
| 1700 <td>TGCCG</td> | |
| 1701 <td>125</td> | |
| 1702 <td>0.83002883</td> | |
| 1703 <td>14.93275</td> | |
| 1704 <td>23</td> | |
| 1705 </tr> | |
| 1706 <tr> | |
| 1707 <td>AGGCG</td> | |
| 1708 <td>125</td> | |
| 1709 <td>0.7881193</td> | |
| 1710 <td>6.3016763</td> | |
| 1711 <td>15</td> | |
| 1712 </tr> | |
| 1713 <tr> | |
| 1714 <td>CGGTT</td> | |
| 1715 <td>150</td> | |
| 1716 <td>0.78028923</td> | |
| 1717 <td>10.398446</td> | |
| 1718 <td>9</td> | |
| 1719 </tr> | |
| 1720 <tr> | |
| 1721 <td>GTGAC</td> | |
| 1722 <td>150</td> | |
| 1723 <td>0.7392424</td> | |
| 1724 <td>6.163313</td> | |
| 1725 <td>32</td> | |
| 1726 </tr> | |
| 1727 <tr> | |
| 1728 <td>GCCGA</td> | |
| 1729 <td>115</td> | |
| 1730 <td>0.723456</td> | |
| 1731 <td>12.575301</td> | |
| 1732 <td>24</td> | |
| 1733 </tr> | |
| 1734 <tr> | |
| 1735 <td>CCCGC</td> | |
| 1736 <td>85</td> | |
| 1737 <td>0.7188745</td> | |
| 1738 <td>6.3460584</td> | |
| 1739 <td>30</td> | |
| 1740 </tr> | |
| 1741 <tr> | |
| 1742 <td>CCCCG</td> | |
| 1743 <td>85</td> | |
| 1744 <td>0.7188745</td> | |
| 1745 <td>10.576764</td> | |
| 1746 <td>29</td> | |
| 1747 </tr> | |
| 1748 <tr> | |
| 1749 <td>CGAGA</td> | |
| 1750 <td>135</td> | |
| 1751 <td>0.6303192</td> | |
| 1752 <td>9.333206</td> | |
| 1753 <td>26</td> | |
| 1754 </tr> | |
| 1755 <tr> | |
| 1756 <td>CGGGA</td> | |
| 1757 <td>90</td> | |
| 1758 <td>0.5674459</td> | |
| 1759 <td>6.301676</td> | |
| 1760 <td>24</td> | |
| 1761 </tr> | |
| 1762 <tr> | |
| 1763 <td>CACGG</td> | |
| 1764 <td>85</td> | |
| 1765 <td>0.5347284</td> | |
| 1766 <td>6.2876506</td> | |
| 1767 <td>37</td> | |
| 1768 </tr> | |
| 1769 <tr> | |
| 1770 <td>CGCCT</td> | |
| 1771 <td>80</td> | |
| 1772 <td>0.5300361</td> | |
| 1773 <td>6.6286345</td> | |
| 1774 <td>30</td> | |
| 1775 </tr> | |
| 1776 <tr> | |
| 1777 <td>CCGCA</td> | |
| 1778 <td>75</td> | |
| 1779 <td>0.47076905</td> | |
| 1780 <td>6.2799363</td> | |
| 1781 <td>36</td> | |
| 1782 </tr> | |
| 1783 <tr> | |
| 1784 <td>CGTTG</td> | |
| 1785 <td>40</td> | |
| 1786 <td>0.20807713</td> | |
| 1787 <td>5.2044277</td> | |
| 1788 <td>46</td> | |
| 1789 </tr> | |
| 1790 </table> | |
| 1791 </div> | |
| 1792 </body></html><div class="module"><h2>Files created by FastQC</h2><table cellspacing="2" cellpadding="2"> | |
| 1793 <tr><td><a href="dataset_1.dat_fastqc.zip">dataset_1.dat_fastqc.zip (312.4 KB)</a></td></tr> | |
| 1794 <tr><td><a href="duplication_levels.png">duplication_levels.png (14.5 KB)</a></td></tr> | |
| 1795 <tr><td><a href="fastqc_data.txt">fastqc_data.txt (15.0 KB)</a></td></tr> | |
| 1796 <tr><td><a href="fastqc_report.html">fastqc_report.html (25.2 KB)</a></td></tr> | |
| 1797 <tr><td><a href="kmer_profiles.png">kmer_profiles.png (186.7 KB)</a></td></tr> | |
| 1798 <tr><td><a href="per_base_gc_content.png">per_base_gc_content.png (12.1 KB)</a></td></tr> | |
| 1799 <tr><td><a href="per_base_n_content.png">per_base_n_content.png (7.4 KB)</a></td></tr> | |
| 1800 <tr><td><a href="per_base_quality.png">per_base_quality.png (9.6 KB)</a></td></tr> | |
| 1801 <tr><td><a href="per_base_sequence_content.png">per_base_sequence_content.png (23.9 KB)</a></td></tr> | |
| 1802 <tr><td><a href="per_sequence_gc_content.png">per_sequence_gc_content.png (29.6 KB)</a></td></tr> | |
| 1803 <tr><td><a href="per_sequence_quality.png">per_sequence_quality.png (21.9 KB)</a></td></tr> | |
| 1804 <tr><td><a href="sequence_length_distribution.png">sequence_length_distribution.png (18.9 KB)</a></td></tr> | |
| 1805 <tr><td><a href="summary.txt">summary.txt (465 B)</a></td></tr> | |
| 1806 </table> | |
| 1807 <a href="http://www.bioinformatics.bbsrc.ac.uk/projects/fastqc/">FastQC documentation and full attribution is here</a><br/><hr/> | |
| 1808 FastQC was run by Galaxy using the rgenetics rgFastQC wrapper - see http://rgenetics.org for details and licensing | |
| 1809 </div></div><div class="footer">Produced by <a href="http://www.bioinformatics.bbsrc.ac.uk/projects/fastqc/">FastQC</a> (version 0.10.0)</div> |