Mercurial > repos > devteam > fastqc
diff test-data/fastqc_data_nogroup.txt @ 23:5ec9f6bceaee draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 9aa395df821f0d3607867c83536ac97f9ffe8b29
| author | iuc |
|---|---|
| date | Thu, 08 Jun 2023 20:02:11 +0000 |
| parents | 3d0c7bdf12f5 |
| children |
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--- a/test-data/fastqc_data_nogroup.txt Sun Sep 12 11:20:27 2021 +0000 +++ b/test-data/fastqc_data_nogroup.txt Thu Jun 08 20:02:11 2023 +0000 @@ -1,10 +1,11 @@ -##FastQC 0.11.9 +##FastQC 0.12.1 >>Basic Statistics pass #Measure Value Filename 1000trimmed_fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4905 +Total Bases 254.2 kbp Sequences flagged as poor quality 0 Sequence length 1-108 %GC 40 @@ -577,125 +578,125 @@ >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 98.73598369011212 -#Duplication Level Percentage of deduplicated Percentage of total -1 99.44249432170142 98.1855249745158 -2 0.47491224447656405 0.9378185524974516 -3 0.041296716911005574 0.12232415902140673 -4 0.020648358455502787 0.08154943934760449 -5 0.0 0.0 -6 0.0 0.0 -7 0.0 0.0 -8 0.0 0.0 -9 0.0 0.0 ->10 0.020648358455502787 0.672782874617737 ->50 0.0 0.0 ->100 0.0 0.0 ->500 0.0 0.0 ->1k 0.0 0.0 ->5k 0.0 0.0 ->10k+ 0.0 0.0 +#Duplication Level Percentage of total +1 98.1855249745158 +2 0.9378185524974516 +3 0.12232415902140673 +4 0.08154943934760449 +5 0.0 +6 0.0 +7 0.0 +8 0.0 +9 0.0 +>10 0.672782874617737 +>50 0.0 +>100 0.0 +>500 0.0 +>1k 0.0 +>5k 0.0 +>10k+ 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATGCATGCATGCATGCATGCATGCATGCATGCATGCATGCATGCATGCAT 33 0.672782874617737 No Hit >>END_MODULE >>Adapter Content pass -#Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter -1 0.0 0.0 0.0 0.0 0.0 -2 0.0 0.0 0.0 0.0 0.0 -3 0.0 0.0 0.0 0.0 0.0 -4 0.0 0.0 0.0 0.0 0.0 -5 0.0 0.0 0.0 0.0 0.0 -6 0.0 0.0 0.0 0.0 0.0 -7 0.0 0.0 0.0 0.0 0.0 -8 0.0 0.0 0.0 0.0 0.0 -9 0.0 0.0 0.0 0.0 0.0 -10 0.0 0.0 0.0 0.0 0.0 -11 0.0 0.0 0.0 0.0 0.0 -12 0.0 0.0 0.0 0.0 0.0 -13 0.0 0.0 0.0 0.0 0.0 -14 0.0 0.0 0.0 0.0 0.0 -15 0.0 0.0 0.0 0.0 0.0 -16 0.0 0.0 0.0 0.0 0.0 -17 0.0 0.0 0.0 0.0 0.0 -18 0.0 0.0 0.0 0.0 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