Mercurial > repos > devteam > fastx_artifacts_filter
comparison fastx_artifacts_filter.xml @ 1:c8808979ba33
Removed excess version attributes.
author | Dave Bouvier <dave@bx.psu.edu> |
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date | Tue, 03 Dec 2013 12:36:13 -0500 |
parents | 7f9660a246c0 |
children | 09070cacefd8 |
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0:7f9660a246c0 | 1:c8808979ba33 |
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8 -Q 33 | 8 -Q 33 |
9 #end if | 9 #end if |
10 </command> | 10 </command> |
11 | 11 |
12 <inputs> | 12 <inputs> |
13 <param format="fasta,fastqsanger,fastqsolexa,fastqillumina" version="1.0.0" name="input" type="data" label="Library to filter" /> | 13 <param format="fasta,fastqsanger,fastqsolexa,fastqillumina" name="input" type="data" label="Library to filter" /> |
14 | 14 |
15 </inputs> | 15 </inputs> |
16 | 16 |
17 <tests> | 17 <tests> |
18 <test> | 18 <test> |
19 <!-- Filter FASTA file --> | 19 <!-- Filter FASTA file --> |
20 <param version="1.0.0" name="input" value="fastx_artifacts1.fasta" /> | 20 <param name="input" value="fastx_artifacts1.fasta" /> |
21 <output version="1.0.0" name="output" file="fastx_artifacts1.out" /> | 21 <param name="output" file="fastx_artifacts1.out" /> |
22 </test> | 22 </test> |
23 <test> | 23 <test> |
24 <!-- Filter FASTQ file --> | 24 <!-- Filter FASTQ file --> |
25 <param version="1.0.0" name="input" value="fastx_artifacts2.fastq" ftype="fastqsanger" /> | 25 <param name="input" value="fastx_artifacts2.fastq" ftype="fastqsanger" /> |
26 <output version="1.0.0" name="output" file="fastx_artifacts2.out" /> | 26 <param name="output" file="fastx_artifacts2.out" /> |
27 </test> | 27 </test> |
28 </tests> | 28 </tests> |
29 | 29 |
30 <outputs> | 30 <outputs> |
31 <data format="input" version="1.0.0" name="output" metadata_source="input" /> | 31 <data format="input" name="output" metadata_source="input" /> |
32 </outputs> | 32 </outputs> |
33 <help> | 33 <help> |
34 **What it does** | 34 **What it does** |
35 | 35 |
36 This tool filters sequencing artifacts (reads with all but 3 identical bases). | 36 This tool filters sequencing artifacts (reads with all but 3 identical bases). |