Mercurial > repos > devteam > fastx_barcode_splitter

diff macros.xml @ 6:0b7ec11b3c7c draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/fastx_toolkit/fastx_barcode_splitter commit fd099d17eceaa319fbfe429f4725328d88b18c9f
author iuc
date Thu, 10 Aug 2023 06:53:42 +0000
parents 4bedca26c133
children
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line diff
--- a/macros.xml	Thu Oct 11 09:35:51 2018 -0400
+++ b/macros.xml	Thu Aug 10 06:53:42 2023 +0000
@@ -21,7 +21,9 @@
     <token name="@GZIP@">
         <![CDATA[
             #if $input.is_of_type('fasta.gz', 'fastqsanger.gz', 'fastqsolexa.gz', 'fastqillumina.gz'):
-                -z
+                | gzip -c
+            #elif $input.is_of_type('fastqsanger.bz2', 'fastqsolexa.bz2', 'fastqillumina.bz2'):
+                | bzip2 -c
             #end if
         ]]>
     </token>
@@ -32,6 +34,7 @@
         </requirements>
     </xml>
     <token name="@VERSION@">0.0.14</token>
+    <token name="@VERSION_SUFFIX@">2</token>
     <token name="@SANGER@">fastqsanger,fastqsanger.gz,fastqsanger.bz2</token>
     <token name="@SOLEXA@">fastqsolexa,fastqsolexa.gz,fastqsolexa.bz2</token>
     <token name="@ILLUMINA@">fastqillumina,fastqillumina.gz,fastqillumina.bz2</token>