comparison fastx_nucleotides_distribution.xml @ 2:9353010b95df draft

Uploaded tool help images.

1:63d6e2daad48

**Output Examples**

The following chart clearly shows the barcode used at the 5'-end of the library: **GATCT**

.. image:: ${static_path}/fastx_icons/fastq_nucleotides_distribution_1.png
 
In the following chart, one can almost 'read' the most abundant sequence by looking at the dominant values: **TGATA TCGTA TTGAT GACTG AA...**

.. image:: ${static_path}/fastx_icons/fastq_nucleotides_distribution_2.png

The following chart shows a growing number of unknown (N) nucleotides towards later cycles (which might indicate a sequencing problem):

.. image:: ${static_path}/fastx_icons/fastq_nucleotides_distribution_3.png

But most of the time, the chart will look rather random:

.. image:: ${static_path}/fastx_icons/fastq_nucleotides_distribution_4.png

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This tool is based on `FASTX-toolkit`__ by Assaf Gordon.

2:9353010b95df

**Output Examples**

The following chart clearly shows the barcode used at the 5'-end of the library: **GATCT**

.. image:: fastq_nucleotides_distribution_1.png
 
In the following chart, one can almost 'read' the most abundant sequence by looking at the dominant values: **TGATA TCGTA TTGAT GACTG AA...**

.. image:: fastq_nucleotides_distribution_2.png

The following chart shows a growing number of unknown (N) nucleotides towards later cycles (which might indicate a sequencing problem):

.. image:: fastq_nucleotides_distribution_3.png

But most of the time, the chart will look rather random:

.. image:: fastq_nucleotides_distribution_4.png

------

This tool is based on `FASTX-toolkit`__ by Assaf Gordon.