Mercurial > repos > devteam > fastx_renamer
comparison fastx_renamer.xml @ 4:b29d37ca9e41 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/fastx_toolkit/fastx_renamer commit 4c002e52261da2e7609735883d91fa1610ce6ce7"
| author | iuc |
|---|---|
| date | Thu, 30 Jan 2020 13:30:44 -0500 |
| parents | 3599f5451ee2 |
| children | f984bb114520 |
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| 3:3599f5451ee2 | 4:b29d37ca9e41 |
|---|---|
| 1 <tool id="cshl_fastx_renamer" name="Rename sequences" version="@VERSION@+galaxy0" > | 1 <tool id="cshl_fastx_renamer" name="Rename sequences" version="@VERSION@+galaxy1" > |
| 2 <description></description> | 2 <description></description> |
| 3 <macros> | 3 <macros> |
| 4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
| 5 </macros> | 5 </macros> |
| 6 <expand macro="requirements" /> | 6 <expand macro="requirements"> |
| 7 <requirement type="package" version="1.0.8">bzip2</requirement> | |
| 8 </expand> | |
| 7 <command detect_errors="exit_code"><![CDATA[ | 9 <command detect_errors="exit_code"><![CDATA[ |
| 8 @CATS@ fastx_renamer | 10 @CATS@ fastx_renamer |
| 9 -n $TYPE | 11 -n $TYPE |
| 10 -o '$output' | |
| 11 -v | 12 -v |
| 12 @FQQUAL@ | 13 @FQQUAL@ |
| 13 @GZIP@ | 14 @GZIP@ > '$output' |
| 14 ]]></command> | 15 ]]></command> |
| 15 | 16 |
| 16 <inputs> | 17 <inputs> |
| 17 <expand macro="fastx_input" /> | 18 <expand macro="fastx_input" /> |
| 18 | 19 |