Mercurial > repos > devteam > freebayes
comparison macros.xml @ 32:8a7a42541080 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/freebayes commit cce7fcdd5e8ba8636c751f9f974bf07a6845ba1c"
author | iuc |
---|---|
date | Wed, 01 Dec 2021 21:50:06 +0000 |
parents | 57def2d7c093 |
children | a7c9782130e8 |
comparison
equal
deleted
inserted
replaced
31:57def2d7c093 | 32:8a7a42541080 |
---|---|
1 <macros> | 1 <macros> |
2 <token name="@TOOL_VERSION@">1.3.1</token> | 2 <token name="@TOOL_VERSION@">1.3.5</token> |
3 <xml name="requirements"> | 3 <xml name="requirements"> |
4 <requirements> | 4 <requirements> |
5 <requirement type="package" version="@TOOL_VERSION@">freebayes</requirement> | 5 <requirement type="package" version="@TOOL_VERSION@">freebayes</requirement> |
6 <requirement type="package" version="1.9">samtools</requirement> | 6 <requirement type="package" version="1.12">samtools</requirement> |
7 <yield /> | 7 <yield /> |
8 </requirements> | 8 </requirements> |
9 </xml> | 9 </xml> |
10 <xml name="citations"> | 10 <xml name="citations"> |
11 <citations> | 11 <citations> |
30 <param name="processmode" type="select" label="Run in batch mode?" help="Selecting individual mode will generate one VCF dataset for each input BAM dataset. Selecting the merge option will produce one VCF dataset for all input BAM datasets" display="radio"> | 30 <param name="processmode" type="select" label="Run in batch mode?" help="Selecting individual mode will generate one VCF dataset for each input BAM dataset. Selecting the merge option will produce one VCF dataset for all input BAM datasets" display="radio"> |
31 <option value="individual" selected="true">Run individually</option> | 31 <option value="individual" selected="true">Run individually</option> |
32 <option value="merge">Merge output VCFs</option> | 32 <option value="merge">Merge output VCFs</option> |
33 </param> | 33 </param> |
34 <when value="individual"> | 34 <when value="individual"> |
35 <param name="input_bams" type="data" format="bam" label="BAM dataset"> | 35 <param name="input_bams" type="data" format="bam,cram" label="BAM or CRAM dataset"> |
36 <yield /> | 36 <yield /> |
37 </param> | 37 </param> |
38 </when> | 38 </when> |
39 <when value="merge"> | 39 <when value="merge"> |
40 <param name="input_bams" type="data" format="bam" multiple="true" label="BAM dataset(s)"> | 40 <param name="input_bams" type="data" format="bam,cram" multiple="true" label="BAM or CRAM dataset(s)"> |
41 <yield /> | 41 <yield /> |
42 </param> | 42 </param> |
43 </when> | 43 </when> |
44 </conditional> | 44 </conditional> |
45 </xml> | 45 </xml> |