Mercurial > repos > devteam > freebayes
comparison test-data/freebayes-phix174-test4.vcf @ 32:8a7a42541080 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/freebayes commit cce7fcdd5e8ba8636c751f9f974bf07a6845ba1c"
author | iuc |
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date | Wed, 01 Dec 2021 21:50:06 +0000 |
parents | ef2c525bd8cd |
children |
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31:57def2d7c093 | 32:8a7a42541080 |
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1 ##fileformat=VCFv4.2 | 1 ##fileformat=VCFv4.2 |
2 ##fileDate=20191030 | 2 ##fileDate=20191030 |
3 ##source=freeBayes v1.3.1-dirty | 3 ##source=freeBayes v1.3.5 |
4 ##reference=localref.fa | 4 ##reference=localref.fa |
5 ##contig=<ID=phiX174,length=5386> | 5 ##contig=<ID=phiX174,length=5386> |
6 ##phasing=none | 6 ##phasing=none |
7 ##commandline="freebayes --region phiX174:0..5386 --bam b_0.bam --fasta-reference localref.fa --vcf ./vcf_output/part_phiX174:0..5386.vcf --theta 0.001 --ploidy 1" | 7 ##commandline="freebayes --region phiX174:0..5386 --bam b_0.bam --fasta-reference localref.fa --vcf ./vcf_output/part_phiX174:0..5386.vcf --theta 0.001 --ploidy 1" |
8 ##INFO=<ID=NS,Number=1,Type=Integer,Description="Number of samples with data"> | 8 ##INFO=<ID=NS,Number=1,Type=Integer,Description="Number of samples with data"> |