freebayes: revision graph

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Uploaded draft
Tue, 16 Dec 2014 16:15:43 -0500, by devteam
Fix some options. draft
Fri, 29 Aug 2014 12:15:44 -0400, by soranzo
Uploaded draft
Fri, 20 Jun 2014 17:19:11 -0400, by devteam
Uploaded draft
Fri, 20 Jun 2014 17:18:49 -0400, by devteam
Uploaded draft
Fri, 20 Jun 2014 17:16:05 -0400, by devteam
Check exit code instead of stderr, since FreeBayes writes warnings there (e.g. "Could not find any mapped reads in target region chr1:955302..955952"). Also document change of available options in FreeBayes >= 0.9.9. draft
Mon, 17 Feb 2014 10:53:56 -0500, by soranzo
Uploaded updated tool dependency definition. draft
Mon, 16 Dec 2013 16:31:57 -0500, by devteam
Add an optional alternative make route for compiling FreeBayes; solves issues seen installing under certain architectures.
Wed, 05 Jun 2013 15:00:03 -0400, by Daniel Blankenberg
Fix for FreeBayes tool dependency git checkout commands. Credit goes to Lance Parsons.
Wed, 12 Sep 2012 13:06:51 -0400, by Daniel Blankenberg
Make samtools sed command gnu compatible.
Wed, 29 Aug 2012 11:46:04 -0400, by Daniel Blankenberg
Add version string to samtools requirement
Fri, 24 Aug 2012 16:03:20 -0400, by Daniel Blankenberg
Update FreeBayes to 0.9.6_9608597d12e127c847ae03aa03440ab63992fedf.
Fri, 24 Aug 2012 16:00:21 -0400, by Daniel Blankenberg
Fixed git revision string in tool_dependencies.xml and added functional test data
Wed, 15 Aug 2012 10:43:46 -0400, by greg
Change the tool dependecy definition
Fri, 13 Jul 2012 12:52:45 -0400, by greg
Changed freebayes git clone revision to a46483351fd0196637614121868fb5c386612b55
Fri, 13 Jul 2012 12:48:54 -0400, by greg
Uploaded sam_fa_indices.loc.sample
Mon, 02 Jul 2012 17:55:37 -0400, by devteam
Uploaded freebayes with tool dependencies
Mon, 02 Jul 2012 17:49:47 -0400, by devteam

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