# HG changeset patch
# User devteam
# Date 1447263364 18000
# Node ID 48fe74f391abd6c94446ec340d869f99c5256c2d
# Parent  5f6e6582c01d9e6d2099c8ce4afa873591a28655
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit a1517c9d22029095120643bbe2c8fa53754dd2b7

diff -r 5f6e6582c01d -r 48fe74f391ab cuff_macros.xml
--- a/cuff_macros.xml	Thu May 14 13:08:14 2015 -0400
+++ b/cuff_macros.xml	Wed Nov 11 12:36:04 2015 -0500
@@ -10,8 +10,8 @@
     <stdio>
         <exit_code range="1:" />
         <exit_code range=":-1" />
-        <regex match="Error:" />
-        <regex match="Exception:" />
+        <regex match="Error" />
+        <regex match="Exception" />
     </stdio>
   </xml>
   <xml name="condition_inputs">
@@ -88,4 +88,4 @@
             #end for
   </token>
   <token name="@HAS_MULTIPLE_INPUTS@">getattr(inputs, "__len__", [].__len__)() >= 2</token>
-</macros>
\ No newline at end of file
+</macros>
diff -r 5f6e6582c01d -r 48fe74f391ab gffread.xml
--- a/gffread.xml	Thu May 14 13:08:14 2015 -0400
+++ b/gffread.xml	Wed Nov 11 12:36:04 2015 -0500
@@ -24,7 +24,7 @@
             </param>
         </xml>
         <xml name="trackname">
-            <param name="tname" type="text" value="" size="30" optional="true" label="Trackname to use in the second column of each GFF output line" help="(-t track_name}">
+            <param name="tname" type="text" value="" optional="true" label="Trackname to use in the second column of each GFF output line" help="(-t track_name}">
                 <validator type="regex">\w+</validator>
             </param>
         </xml>
@@ -129,7 +129,7 @@
             </param>
             <when value="none"/>
             <when value="filter">
-                <param name="range" type="text" value="" size="60" label="Only show transcripts overlapping coordinate range">
+                <param name="range" type="text" value="" label="Only show transcripts overlapping coordinate range">
                     <help><![CDATA[
                     (-r [['strand']'chr':]'start'..'end') <br> 
                     examples: <br>