annotate test-data/lastz_maf.txt @ 3:d054d95585b1 draft

Uploaded a tool dependency definition that defines a complex repository dependency on package_lastz_1_02_00.

##maf version=1 scoring=lastz.v1.00.23
# lastz.v1.00.23 --yasra95short --ambiguousn --identity=0..100 --census=/Users/anton/galaxy_central/database/files/000/dataset_128.dat --coverage=0 --format=maf 
#
# hsp_threshold      = 10
# gapped_threshold   = 14
# x_drop             = 10
# y_drop             = 14
# gap_open_penalty   = 6
# gap_extend_penalty = 1
#        A    C    G    T
#   A    1   -7   -7   -7
#   C   -7    1   -7   -7
#   G   -7   -7    1   -7
#   T   -7   -7   -7    1
a score=35
s phiX 4294 35 + 5386 CCCCCAACTTGATATTAATAACACTATAGACCACC
s read    1 35 -   36 CCCCCAACTTGATATTAATAACACTATAGACCACC

a score=36
s phiX 3521 36 + 5386 ATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGC
s read    0 36 -   36 ATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGC

a score=36
s phiX 228 36 + 5386 GATGAGGAGAAGTGGCTTAATATGCTTGGCACGTTC
s read   0 36 +   36 GATGAGGAGAAGTGGCTTAATATGCTTGGCACGTTC

a score=36
s phiX 2070 36 + 5386 GTATGTTTCTCCTGCTTATCACCTTCTTGAAGGCTT
s read    0 36 +   36 GTATGTTTCTCCTGCTTATCACCTTCTTGAAGGCTT

a score=35
s phiX 1066 35 + 5386 GGTCAGATTGGTCGTCTTATTACCATTTCAACTAC
s read    1 35 -   36 GGTCAGATTGGTCGTCTTATTACCATTTCAACTAC

a score=36
s phiX 1787 36 + 5386 GTCGTGTTCAACAGACCTATAAACATTCTGTGCCGC
s read    0 36 +   36 GTCGTGTTCAACAGACCTATAAACATTCTGTGCCGC

a score=36
s phiX 1192 36 + 5386 GTAGACATTTTTACTTTTTATGTCCCTCATCGTCAC
s read    0 36 +   36 GTAGACATTTTTACTTTTTATGTCCCTCATCGTCAC

a score=33
s phiX 4562 33 + 5386 GGTTGGTTTATCGTTTTTGACACTCTCACGTTG
s read    0 33 +   36 GGTTGGTTTATCGTTTTTGACACTCTCACGTTG

a score=36
s phiX 2667 36 + 5386 GTTCGCTTTGAGTCTTCTTCGGTTCCGACTACCCTC
s read    0 36 +   36 GTTCGCTTTGAGTCTTCTTCGGTTCCGACTACCCTC

a score=36
s phiX 4247 36 + 5386 GTTACTGAGAAGTTAATGGATGAATTGGCACAATGC
s read    0 36 +   36 GTTACTGAGAAGTTAATGGATGAATTGGCACAATGC

a score=36
s phiX 2862 36 + 5386 GGATTGGTTTCGCTGAATCAGGTTATTAAAGAGATT
s read    0 36 +   36 GGATTGGTTTCGCTGAATCAGGTTATTAAAGAGATT

a score=36
s phiX 2556 36 + 5386 GGTTTTCTTCATTGCATTCAGATGGATACATCTGTC
s read    0 36 +   36 GGTTTTCTTCATTGCATTCAGATGGATACATCTGTC

a score=34
s phiX 2510 34 + 5386 GTCAACGTTATATTTTGATAGTTTGACGGTTAAT
s read    0 34 +   36 GTCAACGTTATATTTTGATAGTTTGACGGTTAAT

a score=36
s phiX 5151 36 + 5386 GGATGAAAATGCTCACAATGACAAATCTGTCCACGG
s read    0 36 +   36 GGATGAAAATGCTCACAATGACAAATCTGTCCACGG

a score=36
s phiX 1589 36 + 5386 AAGCTGCTTATGCTAATTTGCATACTGACCAAGAAC
s read    0 36 -   36 AAGCTGCTTATGCTAATTTGCATACTGACCAAGAAC

a score=36
s phiX 4883 36 + 5386 GGTTACAGTATGCCCATCGCAGTTCGCTACACGCAG
s read    0 36 +   36 GGTTACAGTATGCCCATCGCAGTTCGCTACACGCAG

a score=36
s phiX 5051 36 + 5386 GCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCA
s read    0 36 +   36 GCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCA

a score=36
s phiX 4908 36 + 5386 GCTACACGCAGGACGCTTTTTCACGTTCTGGTTGGT
s read    0 36 +   36 GCTACACGCAGGACGCTTTTTCACGTTCTGGTTGGT

a score=36
s phiX 2862 36 + 5386 GGATTGGTTTCGCTGAATCAGGTTATTAAAGAGATT
s read    0 36 +   36 GGATTGGTTTCGCTGAATCAGGTTATTAAAGAGATT

a score=30
s phiX 4172 30 + 5386 GTTGAGTTCGATAATGGTGATATGTATGTT
s read    0 30 +   36 GTTGAGTTCGATAATGGTGATATGTATGTT

a score=36
s phiX 1700 36 + 5386 GTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCAT
s read    0 36 +   36 GTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCAT

a score=36
s phiX 1682 36 + 5386 CTTATGACGCTGACAACCGTCCTTTACTTGTCATGC
s read    0 36 -   36 CTTATGACGCTGACAACCGTCCTTTACTTGTCATGC

a score=35
s phiX 3125 35 + 5386 GAGGCCGCCCCTAGTTTTGTTTCTGGTGCTATGGC
s read    1 35 -   36 GAGGCCGCCCCTAGTTTTGTTTCTGGTGCTATGGC

a score=36
s phiX 1664 36 + 5386 CATTTGGAGGTAAAACCTCTTATGACGCTGACAACC
s read    0 36 -   36 CATTTGGAGGTAAAACCTCTTATGACGCTGACAACC

a score=36
s phiX 3212 36 + 5386 GTTTCTGATAAGTTGCTTGATTTGGTTGGACTTGGT
s read    0 36 +   36 GTTTCTGATAAGTTGCTTGATTTGGTTGGACTTGGT

a score=36
s phiX 3419 36 + 5386 GAGATTGCCGAGATGCAAAATGAGACTCAAAAAGAG
s read    0 36 +   36 GAGATTGCCGAGATGCAAAATGAGACTCAAAAAGAG

a score=36
s phiX 512 36 + 5386 GTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGC
s read   0 36 +   36 GTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGC

a score=33
s phiX 2881 33 + 5386 AGGTTATTAAAGAGATTATTTGTCTCCAGCCAC
s read    3 33 -   36 AGGTTATTAAAGAGATTATTTGTCTCCAGCCAC

a score=36
s phiX 4470 36 + 5386 GTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGC
s read    0 36 +   36 GTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGC

a score=36
s phiX 1228 36 + 5386 GTTTATGGTGAACAGTGGATTAAGTTCATGAAGGAT
s read    0 36 +   36 GTTTATGGTGAACAGTGGATTAAGTTCATGAAGGAT

a score=36
s phiX 614 36 + 5386 GAGTTTATTGCTGCCGTCATTGCTTATTATGTTCAT
s read   0 36 +   36 GAGTTTATTGCTGCCGTCATTGCTTATTATGTTCAT

a score=36
s phiX 256 36 + 5386 GCACGTTCGTCAAGGACTGGTTTAGATATGAGTCAC
s read   0 36 -   36 GCACGTTCGTCAAGGACTGGTTTAGATATGAGTCAC

a score=36
s phiX 2380 36 + 5386 TTAGGAGTTTAATCATGTTTCAGACTTTTATTTCTC
s read    0 36 -   36 TTAGGAGTTTAATCATGTTTCAGACTTTTATTTCTC

a score=36
s phiX 4097 36 + 5386 ATGCTTGGCTTCCATAAGCAGATGGATAACCGCATC
s read    0 36 -   36 ATGCTTGGCTTCCATAAGCAGATGGATAACCGCATC

a score=36
s phiX 5098 36 + 5386 GCTGTCGCTACTTCCCAAGAAGCTGTTCAGAATCAG
s read    0 36 +   36 GCTGTCGCTACTTCCCAAGAAGCTGTTCAGAATCAG

a score=36
s phiX 4253 36 + 5386 GAGAAGTTAATGGATGAATTGGCACAATGCTACAAT
s read    0 36 +   36 GAGAAGTTAATGGATGAATTGGCACAATGCTACAAT

a score=36
s phiX 3407 36 + 5386 GACAATCAGAAAGAGATTGCCGAGATGCAAAATGAG
s read    0 36 +   36 GACAATCAGAAAGAGATTGCCGAGATGCAAAATGAG

a score=36
s phiX 4042 36 + 5386 GGCTCTTAAACCTGCTATTGAGGCTTGTGGCATTTC
s read    0 36 -   36 GGCTCTTAAACCTGCTATTGAGGCTTGTGGCATTTC

a score=36
s phiX 4559 36 + 5386 GATGGTTGGTTTATCGTTTTTGACACTCTCACGTTG
s read    0 36 +   36 GATGGTTGGTTTATCGTTTTTGACACTCTCACGTTG

a score=36
s phiX 1887 36 + 5386 GACTAAAGAGATTCAGTACCTTAACGCTAAAGGTGC
s read    0 36 +   36 GACTAAAGAGATTCAGTACCTTAACGCTAAAGGTGC

a score=35
s phiX 3433 35 + 5386 GCAAAATGAGACTCAAAAAGAGATTGCTGGCATTC
s read    1 35 -   36 GCAAAATGAGACTCAAAAAGAGATTGCTGGCATTC

a score=36
s phiX 4538 36 + 5386 GCAATGCGACAGGCTCATGCTGATGGTTGGTTTATC
s read    0 36 +   36 GCAATGCGACAGGCTCATGCTGATGGTTGGTTTATC

a score=36
s phiX 1827 36 + 5386 CTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGC
s read    0 36 -   36 CTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGC

a score=36
s phiX 3707 36 + 5386 GACTTAGTTCATCAGCAAACGCAGAATCAGCGGTAT
s read    0 36 +   36 GACTTAGTTCATCAGCAAACGCAGAATCAGCGGTAT

a score=36
s phiX 3325 36 + 5386 GCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGT
s read    0 36 +   36 GCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGT

a score=36
s phiX 4175 36 + 5386 GAGTTCGATAATGGTGATATGTATGTTGACGGCCAT
s read    0 36 +   36 GAGTTCGATAATGGTGATATGTATGTTGACGGCCAT

a score=36
s phiX 21 36 + 5386 GCAGAAGTTAACACTTTCGGATATTTCTGATGAGTC
s read  0 36 +   36 GCAGAAGTTAACACTTTCGGATATTTCTGATGAGTC

a score=36
s phiX 2556 36 + 5386 GGTTTTCTTCATTGCATTCAGATGGATACATCTGTC
s read    0 36 -   36 GGTTTTCTTCATTGCATTCAGATGGATACATCTGTC

a score=36
s phiX 3276 36 + 5386 ATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGC
s read    0 36 -   36 ATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGC

a score=36
s phiX 3591 36 + 5386 AGCAACAGCAGGTTTCCGAGATTATGCGCCAAATGC
s read    0 36 -   36 AGCAACAGCAGGTTTCCGAGATTATGCGCCAAATGC

a score=35
s phiX 357 35 + 5386 GATGCTGTTCAACCACTAATAGGTAAGAAATCATG
s read   0 35 +   36 GATGCTGTTCAACCACTAATAGGTAAGAAATCATG

a score=36
s phiX 1774 36 + 5386 GGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAA
s read    0 36 +   36 GGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAA

a score=36
s phiX 3503 36 + 5386 GTATATGCACAAAATGAGATGCTTGCTTATCAACAG
s read    0 36 +   36 GTATATGCACAAAATGAGATGCTTGCTTATCAACAG

a score=36
s phiX 1553 36 + 5386 CGACTTCTACCACATCTATTGACATTATGGGTCTGC
s read    0 36 -   36 CGACTTCTACCACATCTATTGACATTATGGGTCTGC

a score=36
s phiX 1001 36 + 5386 TGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGC
s read    0 36 -   36 TGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGC

a score=36
s phiX 3625 36 + 5386 GCTTACTCAAGCTCAAACGGCTGGTCAGTATTTTAC
s read    0 36 -   36 GCTTACTCAAGCTCAAACGGCTGGTCAGTATTTTAC

a score=36
s phiX 3571 36 + 5386 GGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTC
s read    0 36 +   36 GGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTC

a score=36
s phiX 1264 36 + 5386 GGTGTTAATGCCACTCCTCTCCCGACTGTTAACACT
s read    0 36 +   36 GGTGTTAATGCCACTCCTCTCCCGACTGTTAACACT

a score=36
s phiX 1331 36 + 5386 GCACGATTAACCCTGATACCAATAAAATCCCTAAGC
s read    0 36 -   36 GCACGATTAACCCTGATACCAATAAAATCCCTAAGC

a score=36
s phiX 4253 36 + 5386 GAGAAGTTAATGGATGAATTGGCACAATGCTACAAT
s read    0 36 +   36 GAGAAGTTAATGGATGAATTGGCACAATGCTACAAT

a score=36
s phiX 4169 36 + 5386 GGCGTTGAGTTCGATAATGGTGATATGTATGTTGAC
s read    0 36 -   36 GGCGTTGAGTTCGATAATGGTGATATGTATGTTGAC

a score=30
s phiX 2811 30 + 5386 GTTTATGTTGGTTTCATGGTTTGGTCTAAC
s read    6 30 -   36 GTTTATGTTGGTTTCATGGTTTGGTCTAAC

a score=36
s phiX 3118 36 + 5386 CCCTGATGAGGCCGCCCCTAGTTTTGTTTCTGGTGC
s read    0 36 -   36 CCCTGATGAGGCCGCCCCTAGTTTTGTTTCTGGTGC

a score=36
s phiX 1669 36 + 5386 GGAGGTAAAACCTCTTATGACGCTGACAACCGTCCT
s read    0 36 +   36 GGAGGTAAAACCTCTTATGACGCTGACAACCGTCCT

a score=36
s phiX 639 36 + 5386 ATTATGTTCATCCCGTCAACATTCAAACGGCCTGTC
s read   0 36 -   36 ATTATGTTCATCCCGTCAACATTCAAACGGCCTGTC

a score=35
s phiX 2749 35 + 5386 GTTATTATACCGTCAAGGACTGTGTGACTATTGAC
s read    0 35 +   36 GTTATTATACCGTCAAGGACTGTGTGACTATTGAC

a score=36
s phiX 4605 36 + 5386 GATTAGAGGCGTTTTATGATAATCCCAATGCTTTGC
s read    0 36 -   36 GATTAGAGGCGTTTTATGATAATCCCAATGCTTTGC

a score=36
s phiX 3572 36 + 5386 GAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCC
s read    0 36 -   36 GAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCC

a score=36
s phiX 5104 36 + 5386 GCTACTTCCCAAGAAGCTGTTCAGAATCAGAATGAG
s read    0 36 +   36 GCTACTTCCCAAGAAGCTGTTCAGAATCAGAATGAG

a score=21
s phiX  0 21 + 5386 GAGTTTTATCGCTTCCATGAC
s read 15 21 -   36 GAGTTTTATCGCTTCCATGAC

a score=36
s phiX 1673 36 + 5386 GTAAAACCTCTTATGACGCTGACAACCGTCCTTTAC
s read    0 36 -   36 GTAAAACCTCTTATGACGCTGACAACCGTCCTTTAC

a score=36
s phiX 4094 36 + 5386 CCAATGCTTGGCTTCCATAAGCAGATGGATAACCGC
s read    0 36 -   36 CCAATGCTTGGCTTCCATAAGCAGATGGATAACCGC

a score=36
s phiX 4550 36 + 5386 GCTCATGCTGATGGTTGGTTTATCGTTTTTGACACT
s read    0 36 +   36 GCTCATGCTGATGGTTGGTTTATCGTTTTTGACACT

a score=36
s phiX 3283 36 + 5386 TGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGC
s read    0 36 -   36 TGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGC

a score=20
s phiX 2937 20 + 5386 GTGCTATTGCTGGCGGTATT
s read    0 20 +   36 GTGCTATTGCTGGCGGTATT

a score=36
s phiX 4004 36 + 5386 GAATGTCACGCTGATTATTTTGACTTTGAGCGTATC
s read    0 36 +   36 GAATGTCACGCTGATTATTTTGACTTTGAGCGTATC

a score=36
s phiX 2478 36 + 5386 GCACCTGTTTTACAGACACCTAAAGCTACATCGTCA
s read    0 36 +   36 GCACCTGTTTTACAGACACCTAAAGCTACATCGTCA

a score=36
s phiX 1081 36 + 5386 CTTATTACCATTTCAACTACTCCGGTTATCGCTGGC
s read    0 36 -   36 CTTATTACCATTTCAACTACTCCGGTTATCGCTGGC

a score=35
s phiX 3044 35 + 5386 GCTACCGATAACAATACTGTAGGCATGGGTGATGC
s read    1 35 -   36 GCTACCGATAACAATACTGTAGGCATGGGTGATGC

a score=36
s phiX 1114 36 + 5386 GGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTC
s read    0 36 -   36 GGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTC

a score=33
s phiX 635 33 + 5386 GCTTATTATGTTCATCCCGTCAACATTCAAACG
s read   0 33 +   36 GCTTATTATGTTCATCCCGTCAACATTCAAACG

a score=26
s phiX 1138 26 + 5386 GTTGGCGCTCTCCGTCTTTCTCCATT
s read    0 26 +   36 GTTGGCGCTCTCCGTCTTTCTCCATT

a score=36
s phiX 851 36 + 5386 CTAAAGGTAAAAAACGTTCTGGCGCTCGCCCTGGTC
s read   0 36 -   36 CTAAAGGTAAAAAACGTTCTGGCGCTCGCCCTGGTC

a score=36
s phiX 5271 36 + 5386 GATTGAGGCTGGGAAAAGTTACTGTAGCCGACGTTT
s read    0 36 +   36 GATTGAGGCTGGGAAAAGTTACTGTAGCCGACGTTT

a score=30
s phiX 4329 36 + 5386 GCCCCGAAGGGGACGAAAAATGGTTTTTAGAGAACG
s read    0 36 +   36 GCCCCGAAGGGGACNANAAATGGTTTTTAGAGAACG

a score=36
s phiX 4890 36 + 5386 GTATGCCCATCGCAGTTCGCTACACGCAGGACGCTT
s read    0 36 +   36 GTATGCCCATCGCAGTTCGCTACACGCAGGACGCTT

a score=34
s phiX 4784 34 + 5386 TTTATGCGGACACTTCCTACAGGTAGCGTTGACC
s read    2 34 -   36 TTTATGCGGACACTTCCTACAGGTAGCGTTGACC

a score=36
s phiX 3618 36 + 5386 GCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGT
s read    0 36 +   36 GCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGT

a score=32
s phiX 4454 32 + 5386 GGTATTAAGGATGAGTGTTCAAGATTGCTGGA
s read    0 32 +   36 GGTATTAAGGATGAGTGTTCAAGATTGCTGGA

a score=36
s phiX 631 36 + 5386 CATTGCTTATTATGTTCATCCCGTCAACATTCAAAC
s read   0 36 -   36 CATTGCTTATTATGTTCATCCCGTCAACATTCAAAC

a score=35
s phiX 2963 35 + 5386 GCTCTTGCTGGTGGCGCCATGTCTAAATTGTTTGG
s read    0 35 +   36 GCTCTTGCTGGTGGCGCCATGTCTAAATTGTTTGG

a score=36
s phiX 2762 36 + 5386 CAAGGACTGTGTGACTATTGACGTCCTTCCCCGTAC
s read    0 36 -   36 CAAGGACTGTGTGACTATTGACGTCCTTCCCCGTAC

a score=36
s phiX 2765 36 + 5386 GGACTGTGTGACTATTGACGTCCTTCCCCGTACGCC
s read    0 36 -   36 GGACTGTGTGACTATTGACGTCCTTCCCCGTACGCC

a score=36
s phiX 1718 36 + 5386 GCTCTAATCTCTGGGCATCTGGCTATGATGTTGATG
s read    0 36 +   36 GCTCTAATCTCTGGGCATCTGGCTATGATGTTGATG

a score=36
s phiX 3099 36 + 5386 AAGGCTCTAATGTTCCTAACCCTGATGAGGCCGCCC
s read    0 36 -   36 AAGGCTCTAATGTTCCTAACCCTGATGAGGCCGCCC

a score=29
s phiX 597 29 + 5386 GCTTTCCTGCTCCTGTTGAGTTTATTGCT
s read   0 29 +   36 GCTTTCCTGCTCCTGTTGAGTTTATTGCT

a score=36
s phiX 4125 36 + 5386 ACCGCATCAAGCTCTTGGAAGAGATTCTGTCTTTTC
s read    0 36 -   36 ACCGCATCAAGCTCTTGGAAGAGATTCTGTCTTTTC

a score=36
s phiX 4025 36 + 5386 GACTTTGAGCGTATCGAGGCTCTTAAACCTGCTATT
s read    0 36 +   36 GACTTTGAGCGTATCGAGGCTCTTAAACCTGCTATT

a score=36
s phiX 2620 36 + 5386 GTGCTGATATTGCTTTTGATGCCGACCCTAAATTTT
s read    0 36 +   36 GTGCTGATATTGCTTTTGATGCCGACCCTAAATTTT

a score=36
s phiX 2748 36 + 5386 GGTTATTATACCGTCAAGGACTGTGTGACTATTGAC
s read    0 36 +   36 GGTTATTATACCGTCAAGGACTGTGTGACTATTGAC

a score=36
s phiX 378 36 + 5386 GGTAAGAAATCATGAGTCAAGTTACTGAACAATCCG
s read   0 36 +   36 GGTAAGAAATCATGAGTCAAGTTACTGAACAATCCG

a score=36
s phiX 2159 36 + 5386 GCCACCATGATTATGACCAGTGTTTCCAGTCCGTTC
s read    0 36 +   36 GCCACCATGATTATGACCAGTGTTTCCAGTCCGTTC

a score=36
s phiX 2872 36 + 5386 CGCTGAATCAGGTTATTAAAGAGATTATTTGTCTCC
s read    0 36 -   36 CGCTGAATCAGGTTATTAAAGAGATTATTTGTCTCC

a score=35
s phiX 1507 35 + 5386 TGGACTGCTCCGCTTCCTCCTGAGACTGAGCTTTC
s read    1 35 -   36 TGGACTGCTCCGCTTCCTCCTGAGACTGAGCTTTC

a score=36
s phiX 3862 36 + 5386 TTTCTGGAAAGACGGTAAAGCTGATGGTATTGGCTC
s read    0 36 -   36 TTTCTGGAAAGACGGTAAAGCTGATGGTATTGGCTC

a score=36
s phiX 5186 36 + 5386 GAGTGCTTAATCCAACTTACCAAGCTGGGTTACGAC
s read    0 36 +   36 GAGTGCTTAATCCAACTTACCAAGCTGGGTTACGAC

a score=36
s phiX 4195 36 + 5386 GTATGTTGACGGCCATAAGGCTGCTTCTGACGTTCG
s read    0 36 +   36 GTATGTTGACGGCCATAAGGCTGCTTCTGACGTTCG

a score=36
s phiX 634 36 + 5386 TGCTTATTATGTTCATCCCGTCAACATTCAAACGGC
s read   0 36 -   36 TGCTTATTATGTTCATCCCGTCAACATTCAAACGGC

a score=35
s phiX 1293 35 + 5386 TAACACTACTGGTTATATTGACCATGCCGCTTTTC
s read    1 35 -   36 TAACACTACTGGTTATATTGACCATGCCGCTTTTC

a score=36
s phiX 5156 36 + 5386 AAAATGCTCACAATGACAAATCTGTCCACGGAGTGC
s read    0 36 -   36 AAAATGCTCACAATGACAAATCTGTCCACGGAGTGC

a score=36
s phiX 771 36 + 5386 GCGCAGGAAACACTGACGTTCTTACTGACGCAGAAG
s read   0 36 +   36 GCGCAGGAAACACTGACGTTCTTACTGACGCAGAAG

a score=36
s phiX 1223 36 + 5386 GTCACGTTTATGGTGAACAGTGGATTAAGTTCATGA
s read    0 36 +   36 GTCACGTTTATGGTGAACAGTGGATTAAGTTCATGA

a score=33
s phiX 1543 33 + 5386 CGCCAAATGACGACTTCTACCACATCTATTGAC
s read    3 33 -   36 CGCCAAATGACGACTTCTACCACATCTATTGAC

a score=36
s phiX 4839 36 + 5386 GCAATCGCCGCCAGTTAAATAGCTTGCAAAATACGT
s read    0 36 +   36 GCAATCGCCGCCAGTTAAATAGCTTGCAAAATACGT

a score=35
s phiX 203 35 + 5386 GATTCTGTCAAAAACTGACGCGTTGGATGAGGAGA
s read   0 35 +   36 GATTCTGTCAAAAACTGACGCGTTGGATGAGGAGA

a score=29
s phiX 3262 29 + 5386 TGATAAAGGAAAGGATACTCGTGATTATC
s read    7 29 -   36 TGATAAAGGAAAGGATACTCGTGATTATC

a score=28
s phiX 2480 36 + 5386 ACCTGTTTTACAGACACCTAAAGCTACATCGTCAAC
s read    0 36 -   36 ACCTGTTTTAAAGACACCTAAAGCTACATCGTCAAC

a score=36
s phiX 331 36 + 5386 AAGAGCGTGGATTACTATCTGAGTCCGATGCTGTTC
s read   0 36 -   36 AAGAGCGTGGATTACTATCTGAGTCCGATGCTGTTC

a score=36
s phiX 3977 36 + 5386 TTTATGGTTCGTTCTTATTACCCTTCTGAATGTCAC
s read    0 36 -   36 TTTATGGTTCGTTCTTATTACCCTTCTGAATGTCAC

a score=36
s phiX 4864 36 + 5386 GCAAAATACGTGGCCTTATGGTTACAGTATGCCCAT
s read    0 36 +   36 GCAAAATACGTGGCCTTATGGTTACAGTATGCCCAT

a score=36
s phiX 3270 36 + 5386 GAAAGGATACTCGTGATTATCTTGCTGCTGCATTTC
s read    0 36 -   36 GAAAGGATACTCGTGATTATCTTGCTGCTGCATTTC

a score=36
s phiX 4173 36 + 5386 TTGAGTTCGATAATGGTGATATGTATGTTGACGGCC
s read    0 36 -   36 TTGAGTTCGATAATGGTGATATGTATGTTGACGGCC

a score=30
s phiX 3809 30 + 5386 GTGGTTGATATTTTTCATGGTATTGATAAA
s read    0 30 +   36 GTGGTTGATATTTTTCATGGTATTGATAAA

a score=28
s phiX 4634 28 + 5386 GCTTTGCGTGACTATTTTCGTGATATTG
s read    0 28 +   36 GCTTTGCGTGACTATTTTCGTGATATTG

a score=36
s phiX 2737 36 + 5386 GCCATGATGGTGGTTATTATACCGTCAAGGACTGTG
s read    0 36 +   36 GCCATGATGGTGGTTATTATACCGTCAAGGACTGTG

a score=14
s phiX 2191 14 + 5386 GTTCAGTTGTTGCA
s read    0 14 +   36 GTTCAGTTGTTGCA

a score=35
s phiX 2702 35 + 5386 CCCGACTGCCTATGATGTTTATCCTTTGAATGGTC
s read    1 35 -   36 CCCGACTGCCTATGATGTTTATCCTTTGAATGGTC

a score=36
s phiX 2942 36 + 5386 ATTGCTGGCGGTATTGCTTCTGCTCTTGCTGGTGGC
s read    0 36 -   36 ATTGCTGGCGGTATTGCTTCTGCTCTTGCTGGTGGC

a score=36
s phiX 3860 36 + 5386 AATTTCTGGAAAGACGGTAAAGCTGATGGTATTGGC
s read    0 36 -   36 AATTTCTGGAAAGACGGTAAAGCTGATGGTATTGGC

a score=36
s phiX 3092 36 + 5386 GCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAG
s read    0 36 +   36 GCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAG

a score=36
s phiX 3150 36 + 5386 GTGCTATGGCTAAAGCTGGTAAAGGACTTCTTGAAG
s read    0 36 +   36 GTGCTATGGCTAAAGCTGGTAAAGGACTTCTTGAAG

a score=36
s phiX 1192 36 + 5386 GTAGACATTTTTACTTTTTATGTCCCTCATCGTCAC
s read    0 36 +   36 GTAGACATTTTTACTTTTTATGTCCCTCATCGTCAC

a score=36
s phiX 156 36 + 5386 CGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGC
s read   0 36 -   36 CGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGC

a score=36
s phiX 4791 36 + 5386 GGACACTTCCTACAGGTAGCGTTGACCCTAATTTTG
s read    0 36 +   36 GGACACTTCCTACAGGTAGCGTTGACCCTAATTTTG

a score=36
s phiX 3848 36 + 5386 GATACTTGGAACAATTTCTGGAAAGACGGTAAAGCT
s read    0 36 +   36 GATACTTGGAACAATTTCTGGAAAGACGGTAAAGCT

a score=35
s phiX 2742 35 + 5386 GATGGTGGTTATTATACCGTCAAGGACTGTGTGAC
s read    1 35 -   36 GATGGTGGTTATTATACCGTCAAGGACTGTGTGAC

a score=36
s phiX 3014 36 + 5386 GCCTCCGGTGGCATTCAAGGTGATGTGCTTGCTACC
s read    0 36 +   36 GCCTCCGGTGGCATTCAAGGTGATGTGCTTGCTACC

a score=36
s phiX 1090 36 + 5386 ATTTCAACTACTCCGGTTATCGCTGGCGACTCCTTC
s read    0 36 -   36 ATTTCAACTACTCCGGTTATCGCTGGCGACTCCTTC

a score=35
s phiX 797 35 + 5386 GACGCAGAAGAAAACGTGCGTCAAAAATTACGTGC
s read   1 35 -   36 GACGCAGAAGAAAACGTGCGTCAAAAATTACGTGC

a score=36
s phiX 4865 36 + 5386 CAAAATACGTGGCCTTATGGTTACAGTATGCCCATC
s read    0 36 -   36 CAAAATACGTGGCCTTATGGTTACAGTATGCCCATC

a score=36
s phiX 4403 36 + 5386 GAACGCCCTCTTAAGGATATTCGCGATGAGTATAAT
s read    0 36 +   36 GAACGCCCTCTTAAGGATATTCGCGATGAGTATAAT

a score=36
s phiX 1654 36 + 5386 GTTATTTCTTCATTTGGAGGTAAAACCTCTTATGAC
s read    0 36 -   36 GTTATTTCTTCATTTGGAGGTAAAACCTCTTATGAC

a score=36
s phiX 5161 36 + 5386 GCTCACAATGACAAATCTGTCCACGGAGTGCTTAAT
s read    0 36 +   36 GCTCACAATGACAAATCTGTCCACGGAGTGCTTAAT

a score=35
s phiX 1248 35 + 5386 TAAGTTCATGAAGGATGGTGTTAATGCCACTCCTC
s read    1 35 -   36 TAAGTTCATGAAGGATGGTGTTAATGCCACTCCTC

a score=36
s phiX 3260 36 + 5386 GCTGATAAAGGAAAGGATACTCGTGATTATCTTGCT
s read    0 36 +   36 GCTGATAAAGGAAAGGATACTCGTGATTATCTTGCT

a score=36
s phiX 3095 36 + 5386 ATTCAAGGCTCTAATGTTCCTAACCCTGATGAGGCC
s read    0 36 -   36 ATTCAAGGCTCTAATGTTCCTAACCCTGATGAGGCC

a score=35
s phiX 2811 35 + 5386 GTTTATGTTGGTTTCATGGTTTGGTCTAACTTTAC
s read    1 35 -   36 GTTTATGTTGGTTTCATGGTTTGGTCTAACTTTAC

a score=30
s phiX 80 30 + 5386 GAATTACTACTGCTTGTTTACGAATTAAAT
s read  0 30 +   36 GAATTACTACTGCTTGTTTACGAATTAAAT

a score=36
s phiX 3458 36 + 5386 GCTGGCATTCAGTCGGCGACTTCACGCCAGAATACG
s read    0 36 +   36 GCTGGCATTCAGTCGGCGACTTCACGCCAGAATACG

a score=35
s phiX 788 35 + 5386 GTTCTTACTGACGCAGAAGAAAACGTGCGTCAAAA
s read   0 35 +   36 GTTCTTACTGACGCAGAAGAAAACGTGCGTCAAAA

a score=36
s phiX 3698 36 + 5386 GCTGAGGTTGACTTAGTTCATCAGCAAACGCAGAAT
s read    0 36 +   36 GCTGAGGTTGACTTAGTTCATCAGCAAACGCAGAAT

a score=31
s phiX 2640 31 + 5386 GCCGACCCTAAATTTTTTGCCTGTTTGGTTC
s read    0 31 +   36 GCCGACCCTAAATTTTTTGCCTGTTTGGTTC

a score=36
s phiX 304 36 + 5386 GTAGAGATTCTCTTGTTGACATTTTAAAAGAGCGTG
s read   0 36 +   36 GTAGAGATTCTCTTGTTGACATTTTAAAAGAGCGTG

a score=35
s phiX 3065 35 + 5386 GGCATGGGTGATGCTGGTATTAAATCTGCCATTCA
s read    0 35 +   36 GGCATGGGTGATGCTGGTATTAAATCTGCCATTCA

a score=36
s phiX 4427 36 + 5386 GATGAGTATAATTACCCCAAAAAGAAAGGTATTAAG
s read    0 36 +   36 GATGAGTATAATTACCCCAAAAAGAAAGGTATTAAG

a score=36
s phiX 1460 36 + 5386 AAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATC
s read    0 36 -   36 AAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATC

a score=36
s phiX 3999 36 + 5386 CTTCTGAATGTCACGCTGATTATTTTGACTTTGAGC
s read    0 36 -   36 CTTCTGAATGTCACGCTGATTATTTTGACTTTGAGC

a score=36
s phiX 219 36 + 5386 GACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTT
s read   0 36 +   36 GACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTT

a score=33
s phiX 3193 33 + 5386 GCAGGCTGGCACTTCTGCCGTTTCTGATAAGTT
s read    0 33 +   36 GCAGGCTGGCACTTCTGCCGTTTCTGATAAGTT

a score=32
s phiX 1265 32 + 5386 GTGTTAATGCCACTCCTCTCCCGACTGTTAAC
s read    0 32 +   36 GTGTTAATGCCACTCCTCTCCCGACTGTTAAC

a score=36
s phiX 4595 36 + 5386 GCTGACGACCGATTAGAGGCGTTTTATGATAATCCC
s read    0 36 -   36 GCTGACGACCGATTAGAGGCGTTTTATGATAATCCC

a score=35
s phiX 1171 35 + 5386 GGCCTTGCTATTGACTCTACTGTAGACATTTTTAC
s read    1 35 -   36 GGCCTTGCTATTGACTCTACTGTAGACATTTTTAC

a score=36
s phiX 635 36 + 5386 GCTTATTATGTTCATCCCGTCAACATTCAAACGGCC
s read   0 36 -   36 GCTTATTATGTTCATCCCGTCAACATTCAAACGGCC

a score=36
s phiX 2872 36 + 5386 CGCTGAATCAGGTTATTAAAGAGATTATTTGTCTCC
s read    0 36 -   36 CGCTGAATCAGGTTATTAAAGAGATTATTTGTCTCC

a score=36
s phiX 1013 36 + 5386 AAACTGGCGCCGAGCGTATGCCGCATGACCTTTCCC
s read    0 36 -   36 AAACTGGCGCCGAGCGTATGCCGCATGACCTTTCCC

a score=36
s phiX 2688 36 + 5386 GTTCCGACTACCCTCCCGACTGCCTATGATGTTTAT
s read    0 36 +   36 GTTCCGACTACCCTCCCGACTGCCTATGATGTTTAT

a score=28
s phiX 2147 36 + 5386 GCGTACTTATTCGCCACCATGATTATGACCAGTGTT
s read    0 36 +   36 GCGTACTTATTCGCCACCATGATTATTACCAGTGTT

a score=35
s phiX 5190 35 + 5386 GCTTAATCCAACTTACCAAGCTGGGTTACGACGCG
s read    0 35 +   36 GCTTAATCCAACTTACCAAGCTGGGTTACGACGCG

a score=36
s phiX 1589 36 + 5386 AAGCTGCTTATGCTAATTTGCATACTGACCAAGAAC
s read    0 36 -   36 AAGCTGCTTATGCTAATTTGCATACTGACCAAGAAC

a score=27
s phiX 570 35 + 5386 GTACGCTGGACTTTGTGGGATACCCTCGCTTTCCT
s read   0 35 +   36 GTACGCTGTACTTTGTGGGATACCCTCGCTTTCCT

a score=36
s phiX 241 36 + 5386 GGCTTAATATGCTTGGCACGTTCGTCAAGGACTGGT
s read   0 36 +   36 GGCTTAATATGCTTGGCACGTTCGTCAAGGACTGGT

a score=36
s phiX 337 36 + 5386 GTGGATTACTATCTGAGTCCGATGCTGTTCAACCAC
s read   0 36 +   36 GTGGATTACTATCTGAGTCCGATGCTGTTCAACCAC

a score=30
s phiX 1111 30 + 5386 GCTGGCGACTCCTTCGAGATGGACGCCGTT
s read    0 30 +   36 GCTGGCGACTCCTTCGAGATGGACGCCGTT

a score=34
s phiX 1253 34 + 5386 TCATGAAGGATGGTGTTAATGCCACTCCTCTCCC
s read    2 34 -   36 TCATGAAGGATGGTGTTAATGCCACTCCTCTCCC

a score=18
s phiX 3730 18 + 5386 GAATCAGCGGTATGGCTC
s read    0 18 +   36 GAATCAGCGGTATGGCTC

a score=28
s phiX 2969 36 + 5386 GCTGGTGGCGCCATGTCTAAATTGTTTGGAGGCGGT
s read    0 36 +   36 GCTGGTGGCGCCATGTCTAAATTTTTTGGAGGCGGT

a score=36
s phiX 5150 36 + 5386 GGGATGAAAATGCTCACAATGACAAATCTGTCCACG
s read    0 36 +   36 GGGATGAAAATGCTCACAATGACAAATCTGTCCACG

a score=36
s phiX 347 36 + 5386 ATCTGAGTCCGATGCTGTTCAACCACTAATAGGTAA
s read   0 36 -   36 ATCTGAGTCCGATGCTGTTCAACCACTAATAGGTAA

a score=35
s phiX 4887 35 + 5386 ACAGTATGCCCATCGCAGTTCGCTACACGCAGGAC
s read    1 35 -   36 ACAGTATGCCCATCGCAGTTCGCTACACGCAGGAC

a score=33
s phiX 3971 33 + 5386 GGCTTTTTTATGGTTCGTTCTTATTACCCTTCT
s read    0 33 +   36 GGCTTTTTTATGGTTCGTTCTTATTACCCTTCT

a score=36
s phiX 5032 36 + 5386 GTCAGATATGGACCTTGCTGCTAAAGGTCTAGGAGC
s read    0 36 +   36 GTCAGATATGGACCTTGCTGCTAAAGGTCTAGGAGC

a score=35
s phiX 1551 35 + 5386 GACGACTTCTACCACATCTATTGACATTATGGGTC
s read    1 35 -   36 GACGACTTCTACCACATCTATTGACATTATGGGTC

a score=36
s phiX 1763 36 + 5386 AAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAAC
s read    0 36 -   36 AAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAAC

a score=36
s phiX 1528 36 + 5386 GAGACTGAGCTTTCTCGCCAAATGACGACTTCTACC
s read    0 36 +   36 GAGACTGAGCTTTCTCGCCAAATGACGACTTCTACC

a score=36
s phiX 4949 36 + 5386 CCTGTTGATGCTAAAGGTGAGCCGCTTAAAGCTACC
s read    0 36 -   36 CCTGTTGATGCTAAAGGTGAGCCGCTTAAAGCTACC

a score=34
s phiX 4483 34 + 5386 GGAGGCCTCCACTATGAAATCGCGTAGAGGCTTT
s read    0 34 -   36 GGAGGCCTCCACTATGAAATCGCGTAGAGGCTTT

a score=27
s phiX 4766 35 + 5386 CATTTCCATGCGGTGCACTTTATGCGGACACTTCC
s read    1 35 -   36 CATTTCCATGCGGTGCATTTTATGCGGACACTTCC

a score=36
s phiX 176 36 + 5386 CTTTGCGACCTTTCGCCATCAACTAACGATTCTGTC
s read   0 36 -   36 CTTTGCGACCTTTCGCCATCAACTAACGATTCTGTC

a score=36
s phiX 2576 36 + 5386 GATGGATACATCTGTCAACGCCGCTAATCAGGTTGT
s read    0 36 +   36 GATGGATACATCTGTCAACGCCGCTAATCAGGTTGT

a score=36
s phiX 155 36 + 5386 GCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCG
s read   0 36 +   36 GCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCG

a score=36
s phiX 226 36 + 5386 TGGATGAGGAGAAGTGGCTTAATATGCTTGGCACGT
s read   0 36 +   36 TGGATGAGGAGAAGTGGCTTAATATGCTTGGCACGT

a score=36
s phiX 573 36 + 5386 CGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC
s read   0 36 -   36 CGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC

a score=36
s phiX 3020 36 + 5386 GGTGGCATTCAAGGTGATGTGCTTGCTACCGATAAC
s read    0 36 +   36 GGTGGCATTCAAGGTGATGTGCTTGCTACCGATAAC

a score=36
s phiX 3730 36 + 5386 GAATCAGCGGTATGGCTCTTCTCATATTGGCGCTAC
s read    0 36 -   36 GAATCAGCGGTATGGCTCTTCTCATATTGGCGCTAC

a score=36
s phiX 2435 36 + 5386 TTCTGATAAGCTGGTTCTCACTTCTGTTACTCCAGC
s read    0 36 +   36 TTCTGATAAGCTGGTTCTCACTTCTGTTACTCCAGC

a score=36
s phiX 2709 36 + 5386 GCCTATGATGTTTATCCTTTGAATGGTCGCCATGAT
s read    0 36 +   36 GCCTATGATGTTTATCCTTTGAATGGTCGCCATGAT

a score=28
s phiX 4227 28 + 5386 TTCGTGATGAGTTTGTATCTGTTACTGA
s read    0 28 +   36 TTCGTGATGAGTTTGTATCTGTTACTGA

a score=34
s phiX 4605 34 + 5386 GATTAGAGGCGTTTTATGATAATCCCAATGCTTT
s read    0 34 +   36 GATTAGAGGCGTTTTATGATAATCCCAATGCTTT

a score=36
s phiX 2765 36 + 5386 GGACTGTGTGACTATTGACGTCCTTCCCCGTACGCC
s read    0 36 -   36 GGACTGTGTGACTATTGACGTCCTTCCCCGTACGCC

a score=34
s phiX 581 34 + 5386 TTTGTGGGATACCCTCGCTTTCCTGCTCCTGTTG
s read   0 34 +   36 TTTGTGGGATACCCTCGCTTTCCTGCTCCTGTTG

a score=26
s phiX 663 26 + 5386 AAACGGCCTGTCTCATCATGGAAGGC
s read  10 26 -   36 AAACGGCCTGTCTCATCATGGAAGGC

a score=36
s phiX 1143 36 + 5386 CGCTCTCCGTCTTTCTCCATTGCGTCGTGGCCTTGC
s read    0 36 -   36 CGCTCTCCGTCTTTCTCCATTGCGTCGTGGCCTTGC

a score=36
s phiX 1513 36 + 5386 GCTCCGCTTCCTCCTGAGACTGAGCTTTCTCGCCAA
s read    0 36 +   36 GCTCCGCTTCCTCCTGAGACTGAGCTTTCTCGCCAA

a score=26
s phiX 4035 26 + 5386 GTATCGAGGCTCTTAAACCTGCTATT
s read    0 26 +   36 GTATCGAGGCTCTTAAACCTGCTATT

a score=36
s phiX 1656 36 + 5386 TATTTCTTCATTTGGAGGTAAAACCTCTTATGACGC
s read    0 36 -   36 TATTTCTTCATTTGGAGGTAAAACCTCTTATGACGC

a score=36
s phiX 2070 36 + 5386 GTATGTTTCTCCTGCTTATCACCTTCTTGAAGGCTT
s read    0 36 +   36 GTATGTTTCTCCTGCTTATCACCTTCTTGAAGGCTT

a score=28
s phiX 1625 36 + 5386 GTGATTACTTCATGCAGCGTTACCATGATGTTATTT
s read    0 36 +   36 GTGATTACTTCATGCAGCGTTACCGTGATGTTATTT

a score=36
s phiX 3249 36 + 5386 GCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTG
s read    0 36 +   36 GCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTG

a score=28
s phiX 1981 36 + 5386 GAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGAT
s read    0 36 +   36 GAAATTTCTATGAATGATGTTTTCCGTTCTGGTGAT

a score=36
s phiX 2216 36 + 5386 AGGTTAAATTTAATGTGACCGTTTATCGCAATCTGC
s read    0 36 -   36 AGGTTAAATTTAATGTGACCGTTTATCGCAATCTGC

a score=29
s phiX 3485 29 + 5386 CAGAATACGAAAGACCAGGTATATGCACA
s read    7 29 -   36 CAGAATACGAAAGACCAGGTATATGCACA

a score=36
s phiX 1689 36 + 5386 CGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAA
s read    0 36 -   36 CGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAA

a score=21
s phiX 3251 29 + 5386 AAGTCTGCCGCTGATAAAGGAAAGGATAC
s read    7 29 -   36 AAGTCTGCCGATGATAAAGGAAAGGATAC

a score=36
s phiX 1081 36 + 5386 CTTATTACCATTTCAACTACTCCGGTTATCGCTGGC
s read    0 36 -   36 CTTATTACCATTTCAACTACTCCGGTTATCGCTGGC

a score=36
s phiX 4281 36 + 5386 GCTACAATGTGCTCCCCCAACTTGATATTAATAACA
s read    0 36 -   36 GCTACAATGTGCTCCCCCAACTTGATATTAATAACA

a score=34
s phiX 4135 34 + 5386 GCTCTTGGAAGAGATTCTGTCTTTTCGTATGCAG
s read    0 34 +   36 GCTCTTGGAAGAGATTCTGTCTTTTCGTATGCAG

a score=36
s phiX 4413 36 + 5386 TTAAGGATATTCGCGATGAGTATAATTACCCCAAAA
s read    0 36 +   36 TTAAGGATATTCGCGATGAGTATAATTACCCCAAAA

a score=36
s phiX 3987 36 + 5386 GTTCTTATTACCCTTCTGAATGTCACGCTGATTATT
s read    0 36 -   36 GTTCTTATTACCCTTCTGAATGTCACGCTGATTATT

a score=36
s phiX 4202 36 + 5386 GACGGCCATAAGGCTGCTTCTGACGTTCGTGATGAG
s read    0 36 +   36 GACGGCCATAAGGCTGCTTCTGACGTTCGTGATGAG

a score=28
s phiX 4097 36 + 5386 ATGCTTGGCTTCCATAAGCAGATGGATAACCGCATC
s read    0 36 -   36 ATGCTTGGCTTCAATAAGCAGATGGATAACCGCATC

a score=35
s phiX 4306 35 + 5386 TATTAATAACACTATAGACCACCGCCCCGAAGGGG
s read    0 35 +   36 TATTAATAACACTATAGACCACCGCCCCGAAGGGG

a score=35
s phiX 1520 35 + 5386 TTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACG
s read    0 35 +   36 TTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACG

a score=36
s phiX 944 36 + 5386 TAGGTGGTCAACAATTTTAATTGCAGGGGCTTCGGC
s read   0 36 -   36 TAGGTGGTCAACAATTTTAATTGCAGGGGCTTCGGC

a score=36
s phiX 1574 36 + 5386 ACATTATGGGTCTGCAAGCTGCTTATGCTAATTTGC
s read    0 36 -   36 ACATTATGGGTCTGCAAGCTGCTTATGCTAATTTGC

a score=36
s phiX 2688 36 + 5386 GTTCCGACTACCCTCCCGACTGCCTATGATGTTTAT
s read    0 36 +   36 GTTCCGACTACCCTCCCGACTGCCTATGATGTTTAT

a score=36
s phiX 2098 36 + 5386 GAAGGCTTCCCATTCATTCAGGAACCGCCTTCTGGT
s read    0 36 +   36 GAAGGCTTCCCATTCATTCAGGAACCGCCTTCTGGT

a score=36
s phiX 523 36 + 5386 TACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGC
s read   0 36 -   36 TACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGC

a score=36
s phiX 1251 36 + 5386 GTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCC
s read    0 36 +   36 GTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCC

a score=33
s phiX 4915 33 + 5386 GCAGGACGCTTTTTCACGTTCTGGTTGGTTGTG
s read    0 33 +   36 GCAGGACGCTTTTTCACGTTCTGGTTGGTTGTG

a score=29
s phiX 3827 29 + 5386 GGTATTGATAAAGCTGTTGCCGATACTTG
s read    0 29 +   36 GGTATTGATAAAGCTGTTGCCGATACTTG

a score=36
s phiX 3755 36 + 5386 ATTGGCGCTACTGCAAAGGATATTTCTAATGTCGTC
s read    0 36 -   36 ATTGGCGCTACTGCAAAGGATATTTCTAATGTCGTC

a score=26
s phiX 663 26 + 5386 AAACGGCCTGTCTCATCATGGAAGGC
s read  10 26 -   36 AAACGGCCTGTCTCATCATGGAAGGC

a score=36
s phiX 1115 36 + 5386 GCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCC
s read    0 36 -   36 GCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCC

a score=28
s phiX 3098 28 + 5386 CAAGGCTCTAATGTTCCTAACCCTGATG
s read    0 28 -   36 CAAGGCTCTAATGTTCCTAACCCTGATG

a score=36
s phiX 3081 36 + 5386 GTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTA
s read    0 36 -   36 GTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTA

a score=27
s phiX 4220 27 + 5386 TCTGACGTTCGTGATGAGTTTGTATCT
s read    0 27 +   36 TCTGACGTTCGTGATGAGTTTGTATCT

a score=36
s phiX 612 36 + 5386 TTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTC
s read   0 36 -   36 TTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTC

a score=36
s phiX 4935 36 + 5386 CTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGC
s read    0 36 -   36 CTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGC

a score=36
s phiX 288 36 + 5386 TCACATTTTGTTCATGGTAGAGATTCTCTTGTTGAC
s read   0 36 +   36 TCACATTTTGTTCATGGTAGAGATTCTCTTGTTGAC

a score=36
s phiX 4689 36 + 5386 GCAAGGCTAATGATTCACACGCCGACTGCTATCAGT
s read    0 36 +   36 GCAAGGCTAATGATTCACACGCCGACTGCTATCAGT

a score=23
s phiX 2546 23 + 5386 TGGTAATGGTGGTTTTCTTCATT
s read    0 23 +   36 TGGTAATGGTGGTTTTCTTCATT

a score=36
s phiX 3519 36 + 5386 AGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTC
s read    0 36 -   36 AGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTC

a score=36
s phiX 3857 36 + 5386 AACAATTTCTGGAAAGACGGTAAAGCTGATGGTATT
s read    0 36 -   36 AACAATTTCTGGAAAGACGGTAAAGCTGATGGTATT

a score=36
s phiX 3343 36 + 5386 TTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAA
s read    0 36 -   36 TTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAA

a score=27
s phiX 4671 27 + 5386 TTCTTGCTGCCGAGGGTCGCAAGGCTA
s read    0 27 +   36 TTCTTGCTGCCGAGGGTCGCAAGGCTA

a score=31
s phiX 1345 31 + 5386 GATACCAATAAAATCCCTAAGCATTTGTTTC
s read    0 31 +   36 GATACCAATAAAATCCCTAAGCATTTGTTTC

a score=36
s phiX 1799 36 + 5386 AGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTC
s read    0 36 -   36 AGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTC

a score=36
s phiX 5076 36 + 5386 GGAACAACTCACTAAAAACCAAGCTGTCGCTACTTC
s read    0 36 +   36 GGAACAACTCACTAAAAACCAAGCTGTCGCTACTTC

a score=35
s phiX 2762 35 + 5386 CAAGGACTGTGTGACTATTGACGTCCTTCCCCGTA
s read    1 35 -   36 CAAGGACTGTGTGACTATTGACGTCCTTCCCCGTA

a score=36
s phiX 4281 36 + 5386 GCTACAATGTGCTCCCCCAACTTGATATTAATAACA
s read    0 36 +   36 GCTACAATGTGCTCCCCCAACTTGATATTAATAACA

a score=27
s phiX 4655 27 + 5386 GATATTGGTCGTATGGTTCTTGCTGCC
s read    0 27 +   36 GATATTGGTCGTATGGTTCTTGCTGCC

a score=18
s phiX 4934 18 + 5386 TCTGGTTGGTTGTGGCCT
s read    0 18 +   36 TCTGGTTGGTTGTGGCCT

a score=33
s phiX 1202 33 + 5386 TTACTTTTTATGTCCCTCATCGTCACGTTTATG
s read    0 33 +   36 TTACTTTTTATGTCCCTCATCGTCACGTTTATG

a score=36
s phiX 5106 36 + 5386 TACTTCCCAAGAAGCTGTTCAGAATCAGAATGAGCC
s read    0 36 -   36 TACTTCCCAAGAAGCTGTTCAGAATCAGAATGAGCC

a score=35
s phiX 5167 35 + 5386 AATGACAAATCTGTCCACGGAGTGCTTAATCCAAC
s read    1 35 -   36 AATGACAAATCTGTCCACGGAGTGCTTAATCCAAC

a score=28
s phiX 2955 36 + 5386 TTGCTTCTGCTCTTGCTGGTGGCGCCATGTCTAAAT
s read    0 36 +   36 TTGCTTCTGCTCTTGCTTGTGGCGCCATGTCTAAAT

a score=30
s phiX 623 30 + 5386 GCTGCCGTCATTGCTTATTATGTTCATCCC
s read   0 30 +   36 GCTGCCGTCATTGCTTATTATGTTCATCCC

a score=35
s phiX 1876 35 + 5386 CCGCCTACTGCGACTAAAGAGATTCAGTACCTTAA
s read    1 35 -   36 CCGCCTACTGCGACTAAAGAGATTCAGTACCTTAA

a score=36
s phiX 1213 36 + 5386 GTCCCTCATCGTCACGTTTATGGTGAACAGTGGATT
s read    0 36 +   36 GTCCCTCATCGTCACGTTTATGGTGAACAGTGGATT

a score=27
s phiX 557 27 + 5386 GCTTGCGTTTATGGTACGCTGGACTTT
s read   0 27 +   36 GCTTGCGTTTATGGTACGCTGGACTTT

a score=36
s phiX 3628 36 + 5386 TACTCAAGCTCAAACGGCTGGTCAGTATTTTACCAA
s read    0 36 -   36 TACTCAAGCTCAAACGGCTGGTCAGTATTTTACCAA

a score=35
s phiX 2253 35 + 5386 GACCACTCGCGATTCAATCATGACTTCGTGATAAA
s read    0 35 +   36 GACCACTCGCGATTCAATCATGACTTCGTGATAAA

a score=36
s phiX 2478 36 + 5386 GCACCTGTTTTACAGACACCTAAAGCTACATCGTCA
s read    0 36 +   36 GCACCTGTTTTACAGACACCTAAAGCTACATCGTCA

a score=36
s phiX 3000 36 + 5386 GCGGTCAAAAAGCCGCCTCCGGTGGCATTCAAGGTG
s read    0 36 +   36 GCGGTCAAAAAGCCGCCTCCGGTGGCATTCAAGGTG

a score=35
s phiX 4666 35 + 5386 TATGGTTCTTGCTGCCGAGGGTCGCAAGGCTAATG
s read    0 35 +   36 TATGGTTCTTGCTGCCGAGGGTCGCAAGGCTAATG

a score=36
s phiX 3463 36 + 5386 CATTCAGTCGGCGACTTCACGCCAGAATACGAAAGA
s read    0 36 -   36 CATTCAGTCGGCGACTTCACGCCAGAATACGAAAGA

a score=35
s phiX 4910 35 + 5386 TACACGCAGGACGCTTTTTCACGTTCTGGTTGGTT
s read    0 35 +   36 TACACGCAGGACGCTTTTTCACGTTCTGGTTGGTT

a score=29
s phiX 4591 29 + 5386 GTTGGCTGACGACCGATTAGAGGCGTTTT
s read    0 29 +   36 GTTGGCTGACGACCGATTAGAGGCGTTTT

a score=28
s phiX 2221 36 + 5386 AAATTTAATGTGACCGTTTATCGCAATCTGCCGACC
s read    0 36 -   36 AAATTTAATGTGAACGTTTATCGCAATCTGCCGACC

a score=35
s phiX 645 35 + 5386 TTCATCCCGTCAACATTCAAACGGCCTGTCTCATC
s read   0 35 +   36 TTCATCCCGTCAACATTCAAACGGCCTGTCTCATC

a score=36
s phiX 1363 36 + 5386 AAGCATTTGTTTCAGGGTTATTTGAATATCTATAAC
s read    0 36 -   36 AAGCATTTGTTTCAGGGTTATTTGAATATCTATAAC

a score=35
s phiX 1612 35 + 5386 ACTGACCAAGAACGTGATTACTTCATGCAGCGTTA
s read    1 35 -   36 ACTGACCAAGAACGTGATTACTTCATGCAGCGTTA

a score=35
s phiX 1044 35 + 5386 TTCCCATCTTGGCTTCCTTGCTGGTCAGATTGGTC
s read    0 35 +   36 TTCCCATCTTGGCTTCCTTGCTGGTCAGATTGGTC

a score=25
s phiX 2884 33 + 5386 TTATTAAAGAGATTATTTGTCTCCAGCCACTTA
s read    0 33 +   36 TTATTAAAGAGATTATTTTTCTCCAGCCACTTA

a score=36
s phiX 1587 36 + 5386 GCAAGCTGCTTATGCTAATTTGCATACTGACCAAGA
s read    0 36 +   36 GCAAGCTGCTTATGCTAATTTGCATACTGACCAAGA

a score=36
s phiX 338 36 + 5386 TGGATTACTATCTGAGTCCGATGCTGTTCAACCACT
s read   0 36 +   36 TGGATTACTATCTGAGTCCGATGCTGTTCAACCACT

a score=36
s phiX 4936 36 + 5386 TGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCC
s read    0 36 +   36 TGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCC

a score=34
s phiX 4343 34 + 5386 GAAAAATGGTTTTTAGAGAACGAGAAGACGGTTA
s read    2 34 -   36 GAAAAATGGTTTTTAGAGAACGAGAAGACGGTTA

a score=36
s phiX 3673 36 + 5386 CAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGA
s read    0 36 -   36 CAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGA

a score=36
s phiX 4944 36 + 5386 TGTGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAAG
s read    0 36 +   36 TGTGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAAG

a score=36
s phiX 1945 36 + 5386 GGCGACCCTGTTTTGTATGGCAACTTGCCGCCGCGT
s read    0 36 +   36 GGCGACCCTGTTTTGTATGGCAACTTGCCGCCGCGT

a score=32
s phiX 2661 32 + 5386 TGTTTGGTTCGCTTTGAGTCTTCTTCGGTTCC
s read    0 32 +   36 TGTTTGGTTCGCTTTGAGTCTTCTTCGGTTCC

a score=36
s phiX 3312 36 + 5386 TTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCT
s read    0 36 +   36 TTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCT

a score=25
s phiX 2826 33 + 5386 ATGGTTTGGTCTAACTTTACCGCTACTAAATGC
s read    3 33 -   36 ATGGTTTGGTCAAACTTTACCGCTACTAAATGC

a score=36
s phiX 726 36 + 5386 GTCCGGTTAAAGCCGCTGAATTGTTCGCGTTTACCT
s read   0 36 +   36 GTCCGGTTAAAGCCGCTGAATTGTTCGCGTTTACCT

a score=36
s phiX 554 36 + 5386 GAGGCTTGCGTTTATGGTACGCTGGACTTTGTGGGA
s read   0 36 -   36 GAGGCTTGCGTTTATGGTACGCTGGACTTTGTGGGA

a score=36
s phiX 484 36 + 5386 TGATTTCGATTTTCTGACGAGTAACAAAGTTTGGAT
s read   0 36 +   36 TGATTTCGATTTTCTGACGAGTAACAAAGTTTGGAT

a score=36
s phiX 317 36 + 5386 TGTTGACATTTTAAAAGAGCGTGGATTACTATCTGA
s read   0 36 -   36 TGTTGACATTTTAAAAGAGCGTGGATTACTATCTGA

a score=36
s phiX 909 36 + 5386 TAAAGGCAAGCGTAAAGGCGCTCGTCTTTGGTATGT
s read   0 36 +   36 TAAAGGCAAGCGTAAAGGCGCTCGTCTTTGGTATGT

a score=36
s phiX 4935 36 + 5386 CTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGC
s read    0 36 -   36 CTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGC

a score=36
s phiX 5004 36 + 5386 TCTATGTGGCTAAATACGTTAACAAAAAGTCAGATA
s read    0 36 -   36 TCTATGTGGCTAAATACGTTAACAAAAAGTCAGATA

a score=33
s phiX 1378 33 + 5386 GGTTATTTGAATATCTATAACAACTATTTTAAA
s read    0 33 +   36 GGTTATTTGAATATCTATAACAACTATTTTAAA

a score=30
s phiX 3167 30 + 5386 GGTAAAGGACTTCTTGAAGGTACGTTGCAG
s read    0 30 +   36 GGTAAAGGACTTCTTGAAGGTACGTTGCAG

a score=33
s phiX 2737 33 + 5386 GCCATGATGGTGGTTATTATACCGTCAAGGACT
s read    0 33 +   36 GCCATGATGGTGGTTATTATACCGTCAAGGACT

a score=36
s phiX 4098 36 + 5386 TGCTTGGCTTCCATAAGCAGATGGATAACCGCATCA
s read    0 36 +   36 TGCTTGGCTTCCATAAGCAGATGGATAACCGCATCA

a score=36
s phiX 2573 36 + 5386 TCAGATGGATACATCTGTCAACGCCGCTAATCAGGT
s read    0 36 +   36 TCAGATGGATACATCTGTCAACGCCGCTAATCAGGT

a score=36
s phiX 2452 36 + 5386 TCACTTCTGTTACTCCAGCTTCTTCGGCACCTGTTT
s read    0 36 +   36 TCACTTCTGTTACTCCAGCTTCTTCGGCACCTGTTT

a score=36
s phiX 5178 36 + 5386 TGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGG
s read    0 36 +   36 TGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGG

a score=30
s phiX 3777 30 + 5386 TTTCTAATGTCGTCACTGATGCTGCTTCTG
s read    0 30 +   36 TTTCTAATGTCGTCACTGATGCTGCTTCTG

a score=36
s phiX 1842 36 + 5386 TGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCC
s read    0 36 -   36 TGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCC

a score=36
s phiX 1081 36 + 5386 CTTATTACCATTTCAACTACTCCGGTTATCGCTGGC
s read    0 36 -   36 CTTATTACCATTTCAACTACTCCGGTTATCGCTGGC

a score=36
s phiX 1727 36 + 5386 TCTGGGCATCTGGCTATGATGTTGATGGAACTGACC
s read    0 36 -   36 TCTGGGCATCTGGCTATGATGTTGATGGAACTGACC

a score=28
s phiX 4636 36 + 5386 TTTGCGTGACTATTTTCGTGATATTGGTCGTATGGT
s read    0 36 +   36 TTTGCGTGACTATTTTCGTGATATTGTTCGTATGGT

a score=36
s phiX 2224 36 + 5386 TTTAATGTGACCGTTTATCGCAATCTGCCGACCACT
s read    0 36 +   36 TTTAATGTGACCGTTTATCGCAATCTGCCGACCACT

a score=36
s phiX 3367 36 + 5386 CGGATTTGAGAATCAAAAAGAGCTTACTAAAATGCA
s read    0 36 -   36 CGGATTTGAGAATCAAAAAGAGCTTACTAAAATGCA

a score=36
s phiX 3310 36 + 5386 GCTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTC
s read    0 36 +   36 GCTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTC

a score=36
s phiX 5038 36 + 5386 TATGGACCTTGCTGCTAAAGGTCTAGGAGCTAAAGA
s read    0 36 -   36 TATGGACCTTGCTGCTAAAGGTCTAGGAGCTAAAGA

a score=36
s phiX 2058 36 + 5386 TTATGCGCCTTCGTATGTTTCTCCTGCTTATCACCT
s read    0 36 +   36 TTATGCGCCTTCGTATGTTTCTCCTGCTTATCACCT

a score=36
s phiX 387 36 + 5386 TCATGAGTCAAGTTACTGAACAATCCGTACGTTTCC
s read   0 36 +   36 TCATGAGTCAAGTTACTGAACAATCCGTACGTTTCC

a score=36
s phiX 2753 36 + 5386 TTATACCGTCAAGGACTGTGTGACTATTGACGTCCT
s read    0 36 +   36 TTATACCGTCAAGGACTGTGTGACTATTGACGTCCT

a score=36
s phiX 2127 36 + 5386 TTCTGGTGATTTGCAAGAACGCGTACTTATTCGCCA
s read    0 36 -   36 TTCTGGTGATTTGCAAGAACGCGTACTTATTCGCCA

a score=36
s phiX 153 36 + 5386 TTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTT
s read   0 36 +   36 TTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTT

a score=36
s phiX 3616 36 + 5386 GCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCA
s read    0 36 -   36 GCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCA

a score=36
s phiX 2727 36 + 5386 TTGAATGGTCGCCATGATGGTGGTTATTATACCGTC
s read    0 36 -   36 TTGAATGGTCGCCATGATGGTGGTTATTATACCGTC

a score=36
s phiX 2774 36 + 5386 GACTATTGACGTCCTTCCCCGTACGCCGGGCAATAA
s read    0 36 -   36 GACTATTGACGTCCTTCCCCGTACGCCGGGCAATAA

a score=36
s phiX 4216 36 + 5386 TGCTTCTGACGTTCGTGATGAGTTTGTATCTGTTAC
s read    0 36 +   36 TGCTTCTGACGTTCGTGATGAGTTTGTATCTGTTAC

a score=35
s phiX 4618 35 + 5386 TTATGATAATCCCAATGCTTTGCGTGACTATTTTC
s read    0 35 +   36 TTATGATAATCCCAATGCTTTGCGTGACTATTTTC

a score=35
s phiX 410 35 + 5386 TCCGTACGTTTCCAGACCGCTTTGGCCTCTATTAA
s read   0 35 +   36 TCCGTACGTTTCCAGACCGCTTTGGCCTCTATTAA

a score=35
s phiX 2729 35 + 5386 GAATGGTCGCCATGATGGTGGTTATTATACCGTCA
s read    0 35 +   36 GAATGGTCGCCATGATGGTGGTTATTATACCGTCA

a score=35
s phiX 520 35 + 5386 TGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTG
s read   0 35 +   36 TGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTG

a score=36
s phiX 4259 36 + 5386 TTAATGGATGAATTGGCACAATGCTACAATGTGCTC
s read    0 36 +   36 TTAATGGATGAATTGGCACAATGCTACAATGTGCTC

a score=36
s phiX 1661 36 + 5386 CTTCATTTGGAGGTAAAACCTCTTATGACGCTGACA
s read    0 36 -   36 CTTCATTTGGAGGTAAAACCTCTTATGACGCTGACA

a score=36
s phiX 532 36 + 5386 CTCTCGTGCTCGTCGCTGCGTTGAGGCTTGCGTTTA
s read   0 36 -   36 CTCTCGTGCTCGTCGCTGCGTTGAGGCTTGCGTTTA

a score=35
s phiX 194 35 + 5386 TCAACTAACGATTCTGTCAAAAACTGACGCGTTGG
s read   0 35 +   36 TCAACTAACGATTCTGTCAAAAACTGACGCGTTGG

a score=36
s phiX 2238 36 + 5386 TTATCGCAATCTGCCGACCACTCGCGATTCAATCAT
s read    0 36 +   36 TTATCGCAATCTGCCGACCACTCGCGATTCAATCAT

a score=33
s phiX 1312 33 + 5386 GACCATGCCGCTTTTCTTGGCACGATTAACCCT
s read    0 33 +   36 GACCATGCCGCTTTTCTTGGCACGATTAACCCT

a score=36
s phiX 1544 36 + 5386 GCCAAATGACGACTTCTACCACATCTATTGACATTA
s read    0 36 -   36 GCCAAATGACGACTTCTACCACATCTATTGACATTA

a score=36
s phiX 556 36 + 5386 GGCTTGCGTTTATGGTACGCTGGACTTTGTGGGATA
s read   0 36 -   36 GGCTTGCGTTTATGGTACGCTGGACTTTGTGGGATA

a score=36
s phiX 1248 36 + 5386 TAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCT
s read    0 36 +   36 TAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCT

a score=33
s phiX 4173 33 + 5386 TTGAGTTCGATAATGGTGATATGTATGTTGACG
s read    0 33 +   36 TTGAGTTCGATAATGGTGATATGTATGTTGACG

a score=35
s phiX 613 35 + 5386 TGAGTTTATTGCTGCCGTCATTGCTTATTATGTTC
s read   0 35 +   36 TGAGTTTATTGCTGCCGTCATTGCTTATTATGTTC

a score=36
s phiX 205 36 + 5386 TTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGT
s read   0 36 +   36 TTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGT

a score=36
s phiX 4980 36 + 5386 CTACCAGTTATATGGCTGTTGGTTTCTATGTGGCTA
s read    0 36 -   36 CTACCAGTTATATGGCTGTTGGTTTCTATGTGGCTA

a score=30
s phiX 1701 30 + 5386 TCCTTTACTTGTCATGCGCTCTAATCTCTG
s read    0 30 +   36 TCCTTTACTTGTCATGCGCTCTAATCTCTG

a score=35
s phiX 2320 35 + 5386 TAAAAATTTTAATTTTTGCCGCTGAGGGGTTGACC
s read    0 35 +   36 TAAAAATTTTAATTTTTGCCGCTGAGGGGTTGACC

a score=19
s phiX 4183 19 + 5386 TAATGGTGATATGTATGTT
s read    0 19 +   36 TAATGGTGATATGTATGTT

a score=35
s phiX 4087 35 + 5386 TCAATCCCCAATGCTTGGCTTCCATAAGCAGATGG
s read    0 35 +   36 TCAATCCCCAATGCTTGGCTTCCATAAGCAGATGG

a score=36
s phiX 899 36 + 5386 TGCGAGGTACTAAAGGCAAGCGTAAAGGCGCTCGTC
s read   0 36 +   36 TGCGAGGTACTAAAGGCAAGCGTAAAGGCGCTCGTC

a score=36
s phiX 1154 36 + 5386 TTTCTCCATTGCGTCGTGGCCTTGCTATTGACTCTA
s read    0 36 -   36 TTTCTCCATTGCGTCGTGGCCTTGCTATTGACTCTA

a score=36
s phiX 3586 36 + 5386 TTCCAAGCAACAGCAGGTTTCCGAGATTATGCGCCA
s read    0 36 -   36 TTCCAAGCAACAGCAGGTTTCCGAGATTATGCGCCA

a score=36
s phiX 3786 36 + 5386 TCGTCACTGATGCTGCTTCTGGTGTGGTTGATATTT
s read    0 36 -   36 TCGTCACTGATGCTGCTTCTGGTGTGGTTGATATTT

a score=35
s phiX 3833 35 + 5386 GATAAAGCTGTTGCCGATACTTGGAACAATTTCTG
s read    0 35 +   36 GATAAAGCTGTTGCCGATACTTGGAACAATTTCTG

a score=36
s phiX 988 36 + 5386 TGAGGATAAATTATGTCTAATATTCAAACTGGCGCC
s read   0 36 +   36 TGAGGATAAATTATGTCTAATATTCAAACTGGCGCC

a score=29
s phiX 5357 29 + 5386 ATAAAAATGATTGGCGTATCCAACCTGCA
s read    0 29 +   36 ATAAAAATGATTGGCGTATCCAACCTGCA

a score=36
s phiX 3711 36 + 5386 TAGTTCATCAGCAAACGCAGAATCAGCGGTATGGCT
s read    0 36 +   36 TAGTTCATCAGCAAACGCAGAATCAGCGGTATGGCT

a score=36
s phiX 1206 36 + 5386 TTTTTATGTCCCTCATCGTCACGTTTATGGTGAACA
s read    0 36 +   36 TTTTTATGTCCCTCATCGTCACGTTTATGGTGAACA

a score=21
s phiX 4299 21 + 5386 AACTTGATATTAATAACACTA
s read   15 21 -   36 AACTTGATATTAATAACACTA

a score=36
s phiX 2115 36 + 5386 TCAGGAACCGCCTTCTGGTGATTTGCAAGAACGCGT
s read    0 36 +   36 TCAGGAACCGCCTTCTGGTGATTTGCAAGAACGCGT

a score=36
s phiX 659 36 + 5386 ATTCAAACGGCCTGTCTCATCATGGAAGGCGCTGAA
s read   0 36 -   36 ATTCAAACGGCCTGTCTCATCATGGAAGGCGCTGAA

a score=31
s phiX 1806 31 + 5386 TAAACATTCTGTGCCGCGTTTCTTTGTTCCT
s read    0 31 +   36 TAAACATTCTGTGCCGCGTTTCTTTGTTCCT

a score=36
s phiX 1535 36 + 5386 AGCTTTCTCGCCAAATGACGACTTCTACCACATCTA
s read    0 36 -   36 AGCTTTCTCGCCAAATGACGACTTCTACCACATCTA

a score=35
s phiX 2111 35 + 5386 TCATTCAGGAACCGCCTTCTGGTGATTTGCAAGAA
s read    1 35 -   36 TCATTCAGGAACCGCCTTCTGGTGATTTGCAAGAA

a score=36
s phiX 2815 36 + 5386 ATGTTGGTTTCATGGTTTGGTCTAACTTTACCGCTA
s read    0 36 -   36 ATGTTGGTTTCATGGTTTGGTCTAACTTTACCGCTA

a score=36
s phiX 5175 36 + 5386 ATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGC
s read    0 36 +   36 ATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGC

a score=36
s phiX 3471 36 + 5386 CGGCGACTTCACGCCAGAATACGAAAGACCAGGTAT
s read    0 36 -   36 CGGCGACTTCACGCCAGAATACGAAAGACCAGGTAT

a score=36
s phiX 1947 36 + 5386 CGACCCTGTTTTGTATGGCAACTTGCCGCCGCGTGA
s read    0 36 -   36 CGACCCTGTTTTGTATGGCAACTTGCCGCCGCGTGA

a score=35
s phiX 2211 35 + 5386 TAGTCAGGTTAAATTTAATGTGACCGTTTATCGCA
s read    0 35 +   36 TAGTCAGGTTAAATTTAATGTGACCGTTTATCGCA

a score=35
s phiX 3816 35 + 5386 ATATTTTTCATGGTATTGATAAAGCTGTTGCCGAT
s read    0 35 +   36 ATATTTTTCATGGTATTGATAAAGCTGTTGCCGAT

a score=36
s phiX 3562 36 + 5386 GTCTATTATGGAAAACACCAATCTTTCCAAGCAACA
s read    0 36 -   36 GTCTATTATGGAAAACACCAATCTTTCCAAGCAACA

a score=35
s phiX 4197 35 + 5386 ATGTTGACGGCCATAAGGCTGCTTCTGACGTTCGT
s read    1 35 -   36 ATGTTGACGGCCATAAGGCTGCTTCTGACGTTCGT

a score=35
s phiX 2906 35 + 5386 CCAGCCACTTAAGTGAGGTGATTTATGTTTGGTGC
s read    1 35 -   36 CCAGCCACTTAAGTGAGGTGATTTATGTTTGGTGC

a score=35
s phiX 2842 35 + 5386 TTACCGCTACTAAATGCCGCGGATTGGTTTCGCTG
s read    0 35 +   36 TTACCGCTACTAAATGCCGCGGATTGGTTTCGCTG

a score=31
s phiX 4373 31 + 5386 GTTACGCAGTTTTGCCGCAAGCTGGCTGCTG
s read    0 31 +   36 GTTACGCAGTTTTGCCGCAAGCTGGCTGCTG

a score=16
s phiX 431 16 + 5386 TTGGCCTCTATTAAGC
s read  10 16 -   36 TTGGCCTCTATTAAGC

a score=35
s phiX 1939 35 + 5386 ATTGCTGGCGACCCTGTTTTGTATGGCAACTTGCC
s read    1 35 -   36 ATTGCTGGCGACCCTGTTTTGTATGGCAACTTGCC

a score=36
s phiX 5072 36 + 5386 GAATGGAACAACTCACTAAAAACCAAGCTGTCGCTA
s read    0 36 -   36 GAATGGAACAACTCACTAAAAACCAAGCTGTCGCTA

a score=36
s phiX 4433 36 + 5386 TATAATTACCCCAAAAAGAAAGGTATTAAGGATGAG
s read    0 36 +   36 TATAATTACCCCAAAAAGAAAGGTATTAAGGATGAG

a score=35
s phiX 1273 35 + 5386 GCCACTCCTCTCCCGACTGTTAACACTACTGGTTA
s read    1 35 -   36 GCCACTCCTCTCCCGACTGTTAACACTACTGGTTA

a score=36
s phiX 4439 36 + 5386 TACCCCAAAAAGAAAGGTATTAAGGATGAGTGTTCA
s read    0 36 +   36 TACCCCAAAAAGAAAGGTATTAAGGATGAGTGTTCA

a score=36
s phiX 3919 36 + 5386 GTCAGGATTGACACCCTCCCAATTGTATGTTTTCAT
s read    0 36 +   36 GTCAGGATTGACACCCTCCCAATTGTATGTTTTCAT

a score=35
s phiX 4586 35 + 5386 CTCACGTTGGCTGACGACCGATTAGAGGCGTTTTA
s read    1 35 -   36 CTCACGTTGGCTGACGACCGATTAGAGGCGTTTTA

a score=24
s phiX 3729 24 + 5386 AGAATCAGCGGTATGGCTCTTCTC
s read    0 24 +   36 AGAATCAGCGGTATGGCTCTTCTC

a score=36
s phiX 1706 36 + 5386 TACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCT
s read    0 36 +   36 TACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCT

a score=36
s phiX 1581 36 + 5386 GGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGA
s read    0 36 -   36 GGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGA

a score=36
s phiX 1587 36 + 5386 GCAAGCTGCTTATGCTAATTTGCATACTGACCAAGA
s read    0 36 -   36 GCAAGCTGCTTATGCTAATTTGCATACTGACCAAGA

a score=34
s phiX 1179 34 + 5386 TATTGACTCTACTGTAGACATTTTTACTTTTTAT
s read    0 34 +   36 TATTGACTCTACTGTAGACATTTTTACTTTTTAT

a score=36
s phiX 2697 36 + 5386 ACCCTCCCGACTGCCTATGATGTTTATCCTTTGAAT
s read    0 36 -   36 ACCCTCCCGACTGCCTATGATGTTTATCCTTTGAAT

a score=36
s phiX 3166 36 + 5386 TGGTAAAGGACTTCTTGAAGGTACGTTGCAGGCTGG
s read    0 36 +   36 TGGTAAAGGACTTCTTGAAGGTACGTTGCAGGCTGG

a score=25
s phiX 2497 25 + 5386 CTAAAGCTACATCGTCAACGTTATA
s read   11 25 -   36 CTAAAGCTACATCGTCAACGTTATA

a score=36
s phiX 2288 36 + 5386 AGATTGAGTGTGAGGTTATAACGCCGAAGCGGTAAA
s read    0 36 -   36 AGATTGAGTGTGAGGTTATAACGCCGAAGCGGTAAA

a score=36
s phiX 440 36 + 5386 ATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTA
s read   0 36 -   36 ATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTA

a score=36
s phiX 1011 36 + 5386 TCAAACTGGCGCCGAGCGTATGCCGCATGACCTTTC
s read    0 36 +   36 TCAAACTGGCGCCGAGCGTATGCCGCATGACCTTTC

a score=36
s phiX 160 36 + 5386 GCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATC
s read   0 36 +   36 GCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATC

a score=35
s phiX 1164 35 + 5386 GCGTCGTGGCCTTGCTATTGACTCTACTGTAGACA
s read    1 35 -   36 GCGTCGTGGCCTTGCTATTGACTCTACTGTAGACA

a score=31
s phiX 5014 31 + 5386 TAAATACGTTAACAAAAAGTCAGATATGGAC
s read    5 31 -   36 TAAATACGTTAACAAAAAGTCAGATATGGAC

a score=36
s phiX 2285 36 + 5386 AAAAGATTGAGTGTGAGGTTATAACGCCGAAGCGGT
s read    0 36 -   36 AAAAGATTGAGTGTGAGGTTATAACGCCGAAGCGGT

a score=32
s phiX 800 32 + 5386 GCAGAAGAAAACGTGCGTCAAAAATTACGTGC
s read   0 32 -   36 GCAGAAGAAAACGTGCGTCAAAAATTACGTGC

a score=36
s phiX 1586 36 + 5386 TGCAAGCTGCTTATGCTAATTTGCATACTGACCAAG
s read    0 36 +   36 TGCAAGCTGCTTATGCTAATTTGCATACTGACCAAG

a score=36
s phiX 4577 36 + 5386 TTTGACACTCTCACGTTGGCTGACGACCGATTAGAG
s read    0 36 +   36 TTTGACACTCTCACGTTGGCTGACGACCGATTAGAG

a score=36
s phiX 3569 36 + 5386 ATGGAAAACACCAATCTTTCCAAGCAACAGCAGGTT
s read    0 36 -   36 ATGGAAAACACCAATCTTTCCAAGCAACAGCAGGTT

a score=36
s phiX 495 36 + 5386 TTCTGACGAGTAACAAAGTTTGGATTGCTACTGACC
s read   0 36 -   36 TTCTGACGAGTAACAAAGTTTGGATTGCTACTGACC

a score=36
s phiX 440 36 + 5386 ATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTA
s read   0 36 +   36 ATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTA

a score=30
s phiX 4753 30 + 5386 TAATGGCCGTCTTCATTTCCATGCGGTGCA
s read    0 30 -   36 TAATGGCCGTCTTCATTTCCATGCGGTGCA

a score=35
s phiX 4234 35 + 5386 TGAGTTTGTATCTGTTACTGAGAAGTTAATGGATG
s read    0 35 +   36 TGAGTTTGTATCTGTTACTGAGAAGTTAATGGATG

a score=36
s phiX 2292 36 + 5386 TGAGTGTGAGGTTATAACGCCGAAGCGGTAAAAATT
s read    0 36 -   36 TGAGTGTGAGGTTATAACGCCGAAGCGGTAAAAATT

a score=35
s phiX 1578 35 + 5386 TATGGGTCTGCAAGCTGCTTATGCTAATTTGCATA
s read    1 35 -   36 TATGGGTCTGCAAGCTGCTTATGCTAATTTGCATA

a score=31
s phiX 3331 31 + 5386 TGGTGCTGATGCTTCCTCTGCTGGTATGGTT
s read    0 31 +   36 TGGTGCTGATGCTTCCTCTGCTGGTATGGTT

a score=36
s phiX 4131 36 + 5386 TCAAGCTCTTGGAAGAGATTCTGTCTTTTCGTATGC
s read    0 36 +   36 TCAAGCTCTTGGAAGAGATTCTGTCTTTTCGTATGC

a score=28
s phiX 4774 36 + 5386 TGCGGTGCACTTTATGCGGACACTTCCTACAGGTAG
s read    0 36 +   36 TGCGGTGCATTTTATGCGGACACTTCCTACAGGTAG

a score=16
s phiX 650 24 + 5386 CCCGTCAACATTCAAACGGCCTGT
s read  12 24 -   36 CCCGTAAACATTCAAACGGCCTGT

a score=32
s phiX 0 32 + 5386 GAGTTTTATCGCTTCCATGACGCAGAAGTTAA
s read 4 32 -   36 GAGTTTTATCGCTTCCATGACGCAGAAGTTAA

a score=36
s phiX 53 36 + 5386 AGTCGAAAAATTATCTTGATAAAGCAGGAATTACTA
s read  0 36 -   36 AGTCGAAAAATTATCTTGATAAAGCAGGAATTACTA

a score=35
s phiX 679 35 + 5386 CATGGAAGGCGCTGAATTTACGGAAAACATTATTA
s read   1 35 -   36 CATGGAAGGCGCTGAATTTACGGAAAACATTATTA

a score=36
s phiX 230 36 + 5386 TGAGGAGAAGTGGCTTAATATGCTTGGCACGTTCGT
s read   0 36 +   36 TGAGGAGAAGTGGCTTAATATGCTTGGCACGTTCGT

a score=36
s phiX 4191 36 + 5386 ATATGTATGTTGACGGCCATAAGGCTGCTTCTGACG
s read    0 36 +   36 ATATGTATGTTGACGGCCATAAGGCTGCTTCTGACG

a score=36
s phiX 1579 36 + 5386 ATGGGTCTGCAAGCTGCTTATGCTAATTTGCATACT
s read    0 36 -   36 ATGGGTCTGCAAGCTGCTTATGCTAATTTGCATACT

a score=36
s phiX 610 36 + 5386 TGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGT
s read   0 36 -   36 TGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGT

a score=35
s phiX 4531 35 + 5386 GATGAATGCAATGCGACAGGCTCATGCTGATGGTT
s read    1 35 -   36 GATGAATGCAATGCGACAGGCTCATGCTGATGGTT

a score=30
s phiX 637 30 + 5386 TTATTATGTTCATCCCGTCAACATTCAAAC
s read   0 30 +   36 TTATTATGTTCATCCCGTCAACATTCAAAC

a score=20
s phiX 2846 28 + 5386 CGCTACTAAATGCCGCGGATTGGTTTCG
s read    4 28 +   36 CGCTACTAAATTCCGCGGATTGGTTTCG

a score=36
s phiX 1956 36 + 5386 TTTGTATGGCAACTTGCCGCCGCGTGAAATTTCTAT
s read    0 36 -   36 TTTGTATGGCAACTTGCCGCCGCGTGAAATTTCTAT

a score=36
s phiX 2727 36 + 5386 TTGAATGGTCGCCATGATGGTGGTTATTATACCGTC
s read    0 36 -   36 TTGAATGGTCGCCATGATGGTGGTTATTATACCGTC

a score=36
s phiX 3978 36 + 5386 TTATGGTTCGTTCTTATTACCCTTCTGAATGTCACG
s read    0 36 +   36 TTATGGTTCGTTCTTATTACCCTTCTGAATGTCACG

a score=35
s phiX 539 35 + 5386 GCTCGTCGCTGCGTTGAGGCTTGCGTTTATGGTAC
s read   1 35 -   36 GCTCGTCGCTGCGTTGAGGCTTGCGTTTATGGTAC

a score=36
s phiX 1851 36 + 5386 GTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGC
s read    0 36 -   36 GTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGC

a score=36
s phiX 4683 36 + 5386 AGGGTCGCAAGGCTAATGATTCACACGCCGACTGCT
s read    0 36 -   36 AGGGTCGCAAGGCTAATGATTCACACGCCGACTGCT

a score=32
s phiX 3689 32 + 5386 AAGGTTAGTGCTGAGGTTGACTTAGTTCATCA
s read    0 32 +   36 AAGGTTAGTGCTGAGGTTGACTTAGTTCATCA

a score=36
s phiX 583 36 + 5386 TGTGGGATACCCTCGCTTTCCTGCTCCTGTTGAGTT
s read   0 36 +   36 TGTGGGATACCCTCGCTTTCCTGCTCCTGTTGAGTT

a score=35
s phiX 3851 35 + 5386 ACTTGGAACAATTTCTGGAAAGACGGTAAAGCTGA
s read    1 35 -   36 ACTTGGAACAATTTCTGGAAAGACGGTAAAGCTGA

a score=35
s phiX 2856 35 + 5386 TGCCGCGGATTGGTTTCGCTGAATCAGGTTATTAA
s read    0 35 +   36 TGCCGCGGATTGGTTTCGCTGAATCAGGTTATTAA

a score=26
s phiX 3781 26 + 5386 TAATGTCGTCACTGATGCTGCTTCTG
s read    0 26 +   36 TAATGTCGTCACTGATGCTGCTTCTG

a score=36
s phiX 1727 36 + 5386 TCTGGGCATCTGGCTATGATGTTGATGGAACTGACC
s read    0 36 +   36 TCTGGGCATCTGGCTATGATGTTGATGGAACTGACC

a score=35
s phiX 4657 35 + 5386 TATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGCA
s read    0 35 +   36 TATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGCA

a score=36
s phiX 1720 36 + 5386 TCTAATCTCTGGGCATCTGGCTATGATGTTGATGGA
s read    0 36 -   36 TCTAATCTCTGGGCATCTGGCTATGATGTTGATGGA

a score=36
s phiX 1953 36 + 5386 TGTTTTGTATGGCAACTTGCCGCCGCGTGAAATTTC
s read    0 36 +   36 TGTTTTGTATGGCAACTTGCCGCCGCGTGAAATTTC

a score=36
s phiX 961 36 + 5386 TAATTGCAGGGGCTTCGGCCCCTTACTTGAGGATAA
s read   0 36 +   36 TAATTGCAGGGGCTTCGGCCCCTTACTTGAGGATAA

a score=36
s phiX 2174 36 + 5386 ACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGA
s read    0 36 -   36 ACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGA

a score=36
s phiX 2441 36 + 5386 TAAGCTGGTTCTCACTTCTGTTACTCCAGCTTCTTC
s read    0 36 +   36 TAAGCTGGTTCTCACTTCTGTTACTCCAGCTTCTTC

a score=35
s phiX 5125 35 + 5386 CAGAATCAGAATGAGCCGCAACTTCGGGATGAAAA
s read    1 35 -   36 CAGAATCAGAATGAGCCGCAACTTCGGGATGAAAA

a score=36
s phiX 5205 36 + 5386 CCAAGCTGGGTTACGACGCGACGCCGTTCAACCAGA
s read    0 36 -   36 CCAAGCTGGGTTACGACGCGACGCCGTTCAACCAGA

a score=36
s phiX 2878 36 + 5386 ATCAGGTTATTAAAGAGATTATTTGTCTCCAGCCAC
s read    0 36 +   36 ATCAGGTTATTAAAGAGATTATTTGTCTCCAGCCAC

a score=36
s phiX 2003 36 + 5386 TCCGTTCTGGTGATTCGTCTAAGAAGTTTAAGATTG
s read    0 36 +   36 TCCGTTCTGGTGATTCGTCTAAGAAGTTTAAGATTG

a score=36
s phiX 2153 36 + 5386 TTATTCGCCACCATGATTATGACCAGTGTTTCCAGT
s read    0 36 +   36 TTATTCGCCACCATGATTATGACCAGTGTTTCCAGT

a score=35
s phiX 1092 35 + 5386 TTCAACTACTCCGGTTATCGCTGGCGACTCCTTCG
s read    0 35 +   36 TTCAACTACTCCGGTTATCGCTGGCGACTCCTTCG

a score=36
s phiX 3126 36 + 5386 AGGCCGCCCCTAGTTTTGTTTCTGGTGCTATGGCTA
s read    0 36 -   36 AGGCCGCCCCTAGTTTTGTTTCTGGTGCTATGGCTA

a score=36
s phiX 3543 36 + 5386 AGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACA
s read    0 36 -   36 AGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACA

a score=31
s phiX 2507 31 + 5386 ATCGTCAACGTTATATTTTGATAGTTTGACG
s read    0 31 +   36 ATCGTCAACGTTATATTTTGATAGTTTGACG

a score=16
s phiX 3097 24 + 5386 TCAAGGCTCTAATGTTCCTAACCC
s read   12 24 -   36 TCAAGGCTCTAATGTCCCTAACCC

a score=36
s phiX 3599 36 + 5386 CAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAA
s read    0 36 -   36 CAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAA

a score=36
s phiX 1733 36 + 5386 CATCTGGCTATGATGTTGATGGAACTGACCAAACGT
s read    0 36 -   36 CATCTGGCTATGATGTTGATGGAACTGACCAAACGT

a score=33
s phiX 2654 33 + 5386 TTTTGCCTGTTTGGTTCGCTTTGAGTCTTCTTC
s read    0 33 +   36 TTTTGCCTGTTTGGTTCGCTTTGAGTCTTCTTC

a score=36
s phiX 2933 36 + 5386 TTTGGTGCTATTGCTGGCGGTATTGCTTCTGCTCTT
s read    0 36 -   36 TTTGGTGCTATTGCTGGCGGTATTGCTTCTGCTCTT

a score=36
s phiX 1521 36 + 5386 TCCTCCTGAGACTGAGCTTTCTCGCCAAATGACGAC
s read    0 36 +   36 TCCTCCTGAGACTGAGCTTTCTCGCCAAATGACGAC

a score=36
s phiX 4062 36 + 5386 AGGCTTGTGGCATTTCTACTCTTTCTCAATCCCCAA
s read    0 36 -   36 AGGCTTGTGGCATTTCTACTCTTTCTCAATCCCCAA

a score=36
s phiX 3394 36 + 5386 TAAAATGCAACTGGACAATCAGAAAGAGATTGCCGA
s read    0 36 +   36 TAAAATGCAACTGGACAATCAGAAAGAGATTGCCGA

a score=36
s phiX 408 36 + 5386 AATCCGTACGTTTCCAGACCGCTTTGGCCTCTATTA
s read   0 36 +   36 AATCCGTACGTTTCCAGACCGCTTTGGCCTCTATTA

a score=36
s phiX 1866 36 + 5386 TGTTCGTTTTCCGCCTACTGCGACTAAAGAGATTCA
s read    0 36 -   36 TGTTCGTTTTCCGCCTACTGCGACTAAAGAGATTCA

a score=33
s phiX 3779 33 + 5386 TCTAATGTCGTCACTGATGCTGCTTCTGGTGTG
s read    0 33 +   36 TCTAATGTCGTCACTGATGCTGCTTCTGGTGTG

a score=36
s phiX 3981 36 + 5386 TGGTTCGTTCTTATTACCCTTCTGAATGTCACGCTG
s read    0 36 +   36 TGGTTCGTTCTTATTACCCTTCTGAATGTCACGCTG

a score=36
s phiX 2814 36 + 5386 TATGTTGGTTTCATGGTTTGGTCTAACTTTACCGCT
s read    0 36 -   36 TATGTTGGTTTCATGGTTTGGTCTAACTTTACCGCT

a score=36
s phiX 1241 36 + 5386 AGTGGATTAAGTTCATGAAGGATGGTGTTAATGCCA
s read    0 36 -   36 AGTGGATTAAGTTCATGAAGGATGGTGTTAATGCCA

a score=35
s phiX 4658 35 + 5386 ATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGCAA
s read    1 35 -   36 ATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGCAA

a score=36
s phiX 2435 36 + 5386 TTCTGATAAGCTGGTTCTCACTTCTGTTACTCCAGC
s read    0 36 +   36 TTCTGATAAGCTGGTTCTCACTTCTGTTACTCCAGC

a score=35
s phiX 526 35 + 5386 TGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCTT
s read   0 35 +   36 TGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCTT

a score=28
s phiX 4816 36 + 5386 CCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCA
s read    0 36 -   36 CCCTAATTTGGGTCGTCGGGTACGCAATCGCCGCCA

a score=36
s phiX 2099 36 + 5386 AAGGCTTCCCATTCATTCAGGAACCGCCTTCTGGTG
s read    0 36 +   36 AAGGCTTCCCATTCATTCAGGAACCGCCTTCTGGTG

a score=36
s phiX 2761 36 + 5386 TCAAGGACTGTGTGACTATTGACGTCCTTCCCCGTA
s read    0 36 -   36 TCAAGGACTGTGTGACTATTGACGTCCTTCCCCGTA

a score=36
s phiX 4954 36 + 5386 TGATGCTAAAGGTGAGCCGCTTAAAGCTACCAGTTA
s read    0 36 +   36 TGATGCTAAAGGTGAGCCGCTTAAAGCTACCAGTTA

a score=36
s phiX 3760 36 + 5386 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGA
s read    0 36 -   36 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGA

a score=28
s phiX 4498 36 + 5386 GAAATCGCGTAGAGGCTTTGCTATTCAGCGTTTGAT
s read    0 36 -   36 GAAATCGCGTAGAGGCTTTACTATTCAGCGTTTGAT

a score=36
s phiX 4038 36 + 5386 TCGAGGCTCTTAAACCTGCTATTGAGGCTTGTGGCA
s read    0 36 -   36 TCGAGGCTCTTAAACCTGCTATTGAGGCTTGTGGCA

a score=36
s phiX 4787 36 + 5386 ATGCGGACACTTCCTACAGGTAGCGTTGACCCTAAT
s read    0 36 -   36 ATGCGGACACTTCCTACAGGTAGCGTTGACCCTAAT

a score=36
s phiX 1001 36 + 5386 TGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGC
s read    0 36 +   36 TGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGC

a score=36
s phiX 4380 36 + 5386 AGTTTTGCCGCAAGCTGGCTGCTGAACGCCCTCTTA
s read    0 36 -   36 AGTTTTGCCGCAAGCTGGCTGCTGAACGCCCTCTTA

a score=36
s phiX 4255 36 + 5386 GAAGTTAATGGATGAATTGGCACAATGCTACAATGT
s read    0 36 -   36 GAAGTTAATGGATGAATTGGCACAATGCTACAATGT

a score=35
s phiX  9 35 + 5386 CGCTTCCATGACGCAGAAGTTAACACTTTCGGATA
s read  1 35 -   36 CGCTTCCATGACGCAGAAGTTAACACTTTCGGATA

a score=36
s phiX 1578 36 + 5386 TATGGGTCTGCAAGCTGCTTATGCTAATTTGCATAC
s read    0 36 -   36 TATGGGTCTGCAAGCTGCTTATGCTAATTTGCATAC

a score=30
s phiX 988 30 + 5386 TGAGGATAAATTATGTCTAATATTCAAACT
s read   0 30 +   36 TGAGGATAAATTATGTCTAATATTCAAACT

a score=36
s phiX 3861 36 + 5386 ATTTCTGGAAAGACGGTAAAGCTGATGGTATTGGCT
s read    0 36 +   36 ATTTCTGGAAAGACGGTAAAGCTGATGGTATTGGCT

a score=36
s phiX 3277 36 + 5386 TACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCT
s read    0 36 +   36 TACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCT

a score=36
s phiX 348 36 + 5386 TCTGAGTCCGATGCTGTTCAACCACTAATAGGTAAG
s read   0 36 +   36 TCTGAGTCCGATGCTGTTCAACCACTAATAGGTAAG

a score=36
s phiX 4607 36 + 5386 TTAGAGGCGTTTTATGATAATCCCAATGCTTTGCGT
s read    0 36 +   36 TTAGAGGCGTTTTATGATAATCCCAATGCTTTGCGT

a score=35
s phiX 3807 35 + 5386 GTGTGGTTGATATTTTTCATGGTATTGATAAAGCT
s read    0 35 +   36 GTGTGGTTGATATTTTTCATGGTATTGATAAAGCT

a score=31
s phiX 4752 31 + 5386 CTAATGGCCGTCTTCATTTCCATGCGGTGCA
s read    0 31 -   36 CTAATGGCCGTCTTCATTTCCATGCGGTGCA

a score=36
s phiX 285 36 + 5386 GAGTCACATTTTGTTCATGGTAGAGATTCTCTTGTT
s read   0 36 -   36 GAGTCACATTTTGTTCATGGTAGAGATTCTCTTGTT

a score=36
s phiX 2849 36 + 5386 TACTAAATGCCGCGGATTGGTTTCGCTGAATCAGGT
s read    0 36 +   36 TACTAAATGCCGCGGATTGGTTTCGCTGAATCAGGT

a score=35
s phiX 679 35 + 5386 CATGGAAGGCGCTGAATTTACGGAAAACATTATTA
s read   1 35 -   36 CATGGAAGGCGCTGAATTTACGGAAAACATTATTA

a score=36
s phiX 4739 36 + 5386 GAGTATGGTACAGCTAATGGCCGTCTTCATTTCCAT
s read    0 36 -   36 GAGTATGGTACAGCTAATGGCCGTCTTCATTTCCAT

a score=25
s phiX 4654 25 + 5386 TGATATTGGTCGTATGGTTCTTGCT
s read    0 25 +   36 TGATATTGGTCGTATGGTTCTTGCT

a score=35
s phiX 2466 35 + 5386 CCAGCTTCTTCGGCACCTGTTTTACAGACACCTAA
s read    1 35 -   36 CCAGCTTCTTCGGCACCTGTTTTACAGACACCTAA

a score=34
s phiX 319 34 + 5386 TTGACATTTTAAAAGAGCGTGGATTACTATCTGA
s read   0 34 +   36 TTGACATTTTAAAAGAGCGTGGATTACTATCTGA

a score=34
s phiX 1179 34 + 5386 TATTGACTCTACTGTAGACATTTTTACTTTTTAT
s read    0 34 +   36 TATTGACTCTACTGTAGACATTTTTACTTTTTAT

a score=36
s phiX 520 36 + 5386 TGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGA
s read   0 36 -   36 TGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGA

a score=36
s phiX 332 36 + 5386 AGAGCGTGGATTACTATCTGAGTCCGATGCTGTTCA
s read   0 36 -   36 AGAGCGTGGATTACTATCTGAGTCCGATGCTGTTCA

a score=36
s phiX 2755 36 + 5386 ATACCGTCAAGGACTGTGTGACTATTGACGTCCTTC
s read    0 36 +   36 ATACCGTCAAGGACTGTGTGACTATTGACGTCCTTC

a score=36
s phiX 4956 36 + 5386 ATGCTAAAGGTGAGCCGCTTAAAGCTACCAGTTATA
s read    0 36 -   36 ATGCTAAAGGTGAGCCGCTTAAAGCTACCAGTTATA

a score=36
s phiX 71 36 + 5386 ATAAAGCAGGAATTACTACTGCTTGTTTACGAATTA
s read  0 36 -   36 ATAAAGCAGGAATTACTACTGCTTGTTTACGAATTA

a score=36
s phiX 4248 36 + 5386 TTACTGAGAAGTTAATGGATGAATTGGCACAATGCT
s read    0 36 -   36 TTACTGAGAAGTTAATGGATGAATTGGCACAATGCT

a score=36
s phiX 2591 36 + 5386 CAACGCCGCTAATCAGGTTGTTTCTGTTGGTGCTGA
s read    0 36 -   36 CAACGCCGCTAATCAGGTTGTTTCTGTTGGTGCTGA

a score=36
s phiX 1973 36 + 5386 CGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTT
s read    0 36 -   36 CGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTT

a score=36
s phiX 3539 36 + 5386 AAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAA
s read    0 36 -   36 AAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAA

a score=36
s phiX 4129 36 + 5386 CATCAAGCTCTTGGAAGAGATTCTGTCTTTTCGTAT
s read    0 36 -   36 CATCAAGCTCTTGGAAGAGATTCTGTCTTTTCGTAT