comparison lastz_d.xml @ 6:b6d7308c3728 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lastz commit c5379af63b23648020a4709f8ed9d9eac26582aa

5:bd84ff27bc16

        '--infscores=${output}'
        ]]>
    </command>
    <inputs>
        <expand macro="target_input"/>
        <param name="query" format="fasta,fasta.gz,fastq.gz" type="data" label="Select QUERY sequence(s)" help="These are the sequences that you are aligning against TARGET"/>
        <param name="score_file" type="data" format="txt" optional="true" label="Control file for inference" argument="--inferonly[=control_file]" help="Optional controf file. If nothing is selected, LASTZ_D uses default described in the manual"/>
     </inputs>
    <outputs>
        <data format="txt" name="output" label="${tool.name} on ${on_string}: substituion matrix"/>
    </outputs>

6:b6d7308c3728

        '--infscores=${output}'
        ]]>
    </command>
    <inputs>
        <expand macro="target_input"/>
        <param name="query" format="fasta,fastq" type="data" label="Select QUERY sequence(s)" help="These are the sequences that you are aligning against TARGET"/>
        <param name="score_file" type="data" format="txt" optional="true" label="Control file for inference" argument="--inferonly[=control_file]" help="Optional controf file. If nothing is selected, LASTZ_D uses default described in the manual"/>
     </inputs>
    <outputs>
        <data format="txt" name="output" label="${tool.name} on ${on_string}: substituion matrix"/>
    </outputs>