Mercurial > repos > devteam > lastz
view test-data/score_file.txt @ 8:e7f19d6a9af8 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lastz commit a7e9d5b3906b7ebb35b1c29c3a8e8203b2cefccd
author | iuc |
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date | Fri, 18 May 2018 16:58:38 -0400 |
parents | bd84ff27bc16 |
children |
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# This matches the default scoring set for BLASTZ bad_score = X:-1000 # used for sub['X'][*] and sub[*]['X'] fill_score = -100 # used when sub[*][*] is not defined gap_open_penalty = 400 gap_extend_penalty = 30 A C G T A 91 -114 -31 -123 C -114 100 -125 -31 G -31 -125 100 -114 T -123 -31 -114 91