Mercurial > repos > devteam > lastz_paired_reads
comparison lastz_paired_reads_wrapper.xml @ 1:39f974d0884e draft
Updated functional test definition to reference data copied to the test data repository.
| author | devteam |
|---|---|
| date | Wed, 20 Mar 2013 15:19:25 -0400 |
| parents | 96825cee5c25 |
| children | ecc974513241 |
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| 0:96825cee5c25 | 1:39f974d0884e |
|---|---|
| 60 input3: a linker sequence ( a very small fasta file ) | 60 input3: a linker sequence ( a very small fasta file ) |
| 61 input4: a base quality score 454 file ( qual454 ) | 61 input4: a base quality score 454 file ( qual454 ) |
| 62 --> | 62 --> |
| 63 <param name="input2" value="lastz_paired_input2.fasta" ftype="fasta" /> | 63 <param name="input2" value="lastz_paired_input2.fasta" ftype="fasta" /> |
| 64 <param name="ref_source" value="cached" /> | 64 <param name="ref_source" value="cached" /> |
| 65 <param name="input1_2bit" value="/galaxy/data/hg18/seq/chr21.2bit" /> | 65 <param name="input1_2bit" value="hg18chr21" /> |
| 66 <param name="input3" value="lastz_paired_input3.fasta" ftype="fasta" /> | 66 <param name="input3" value="lastz_paired_input3.fasta" ftype="fasta" /> |
| 67 <param name="input4" value="lastz_paired_input4.qual454" ftype="qual454" /> | 67 <param name="input4" value="lastz_paired_input4.qual454" ftype="qual454" /> |
| 68 <param name="how_to_name" value="no" /> | 68 <param name="how_to_name" value="no" /> |
| 69 <output name="output1" file="lastz_paired_out1.sam" /> | 69 <output name="output1" file="lastz_paired_out1.sam" /> |
| 70 </test> | 70 </test> |