Mercurial > repos > devteam > ncbi_blast_plus

annotate test-data/four_human_proteins.fasta @ 14:2fe07f50a41e draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded v0.1.01 - Requires blastdbd datatype (blast_datatypes v0.0.19). Support for makeprofiledb to create protein domain databases and use them in RPS-BLAST and RPS-TBLASTN. Tools now support GI and SeqID filters, and embed the citations.
author peterjc
date Mon, 01 Dec 2014 05:59:16 -0500
parents d375502056f1
children c16c30e9ad5b
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
d375502056f1 Uploaded
devteam
parents:
diff changeset
1 >sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
d375502056f1 Uploaded
devteam
parents:
diff changeset
2 MHPAVFLSLPDLRCSLLLLVTWVFTPVTTEITSLDTENIDEILNNADVALVNFYADWCRF
d375502056f1 Uploaded
devteam
parents:
diff changeset
3 SQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMK
d375502056f1 Uploaded
devteam
parents:
diff changeset
4 REYRGQRSVKALADYIRQQKSDPIQEIRDLAEITTLDRSKRNIIGYFEQKDSDNYRVFER
d375502056f1 Uploaded
devteam
parents:
diff changeset
5 VANILHDDCAFLSAFGDVSKPERYSGDNIIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDK
d375502056f1 Uploaded
devteam
parents:
diff changeset
6 CVPLVREITFENGEELTEEGLPFLILFHMKEDTESLEIFQNEVARQLISEKGTINFLHAD
d375502056f1 Uploaded
devteam
parents:
diff changeset
7 CDKFRHPLLHIQKTPADCPVIAIDSFRHMYVFGDFKDVLIPGKLKQFVFDLHSGKLHREF
d375502056f1 Uploaded
devteam
parents:
diff changeset
8 HHGPDPTDTAPGEQAQDVASSPPESSFQKLAPSEYRYTLLRDRDEL
d375502056f1 Uploaded
devteam
parents:
diff changeset
9 >sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
d375502056f1 Uploaded
devteam
parents:
diff changeset
10 MKKFSRMPKSEGGSGGGAAGGGAGGAGAGAGCGSGGSSVGVRVFAVGRHQVTLEESLAEG
d375502056f1 Uploaded
devteam
parents:
diff changeset
11 GFSTVFLVRTHGGIRCALKRMYVNNMPDLNVCKREITIMKELSGHKNIVGYLDCAVNSIS
d375502056f1 Uploaded
devteam
parents:
diff changeset
12 DNVWEVLILMEYCRAGQVVNQMNKKLQTGFTEPEVLQIFCDTCEAVARLHQCKTPIIHRD
d375502056f1 Uploaded
devteam
parents:
diff changeset
13 LKVENILLNDGGNYVLCDFGSATNKFLNPQKDGVNVVEEEIKKYTTLSYRAPEMINLYGG
d375502056f1 Uploaded
devteam
parents:
diff changeset
14 KPITTKADIWALGCLLYKLCFFTLPFGESQVAICDGNFTIPDNSRYSRNIHCLIRFMLEP
d375502056f1 Uploaded
devteam
parents:
diff changeset
15 DPEHRPDIFQVSYFAFKFAKKDCPVSNINNSSIPSALPEPMTASEAAARKSQIKARITDT
d375502056f1 Uploaded
devteam
parents:
diff changeset
16 IGPTETSIAPRQRPKANSATTATPSVLTIQSSATPVKVLAPGEFGNHRPKGALRPGNGPE
d375502056f1 Uploaded
devteam
parents:
diff changeset
17 ILLGQGPPQQPPQQHRVLQQLQQGDWRLQQLHLQHRHPHQQQQQQQQQQQQQQQQQQQQQ
d375502056f1 Uploaded
devteam
parents:
diff changeset
18 QQQQQQHHHHHHHHLLQDAYMQQYQHATQQQQMLQQQFLMHSVYQPQPSASQYPTMMPQY
d375502056f1 Uploaded
devteam
parents:
diff changeset
19 QQAFFQQQMLAQHQPSQQQASPEYLTSPQEFSPALVSYTSSLPAQVGTIMDSSYSANRSV
d375502056f1 Uploaded
devteam
parents:
diff changeset
20 ADKEAIANFTNQKNISNPPDMSGWNPFGEDNFSKLTEEELLDREFDLLRSNRLEERASSD
d375502056f1 Uploaded
devteam
parents:
diff changeset
21 KNVDSLSAPHNHPPEDPFGSVPFISHSGSPEKKAEHSSINQENGTANPIKNGKTSPASKD
d375502056f1 Uploaded
devteam
parents:
diff changeset
22 QRTGKKTSVQGQVQKGNDESESDFESDPPSPKSSEEEEQDDEEVLQGEQGDFNDDDTEPE
d375502056f1 Uploaded
devteam
parents:
diff changeset
23 NLGHRPLLMDSEDEEEEEKHSSDSDYEQAKAKYSDMSSVYRDRSGSGPTQDLNTILLTSA
d375502056f1 Uploaded
devteam
parents:
diff changeset
24 QLSSDVAVETPKQEFDVFGAVPFFAVRAQQPQQEKNEKNLPQHRFPAAGLEQEEFDVFTK
d375502056f1 Uploaded
devteam
parents:
diff changeset
25 APFSKKVNVQECHAVGPEAHTIPGYPKSVDVFGSTPFQPFLTSTSKSESNEDLFGLVPFD
d375502056f1 Uploaded
devteam
parents:
diff changeset
26 EITGSQQQKVKQRSLQKLSSRQRRTKQDMSKSNGKRHHGTPTSTKKTLKPTYRTPERARR
d375502056f1 Uploaded
devteam
parents:
diff changeset
27 HKKVGRRDSQSSNEFLTISDSKENISVALTDGKDRGNVLQPEESLLDPFGAKPFHSPDLS
d375502056f1 Uploaded
devteam
parents:
diff changeset
28 WHPPHQGLSDIRADHNTVLPGRPRQNSLHGSFHSADVLKMDDFGAVPFTELVVQSITPHQ
d375502056f1 Uploaded
devteam
parents:
diff changeset
29 SQQSQPVELDPFGAAPFPSKQ
d375502056f1 Uploaded
devteam
parents:
diff changeset
30 >sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
d375502056f1 Uploaded
devteam
parents:
diff changeset
31 MATGGRRGAAAAPLLVAVAALLLGAAGHLYPGEVCPGMDIRNNLTRLHELENCSVIEGHL
d375502056f1 Uploaded
devteam
parents:
diff changeset
32 QILLMFKTRPEDFRDLSFPKLIMITDYLLLFRVYGLESLKDLFPNLTVIRGSRLFFNYAL
d375502056f1 Uploaded
devteam
parents:
diff changeset
33 VIFEMVHLKELGLYNLMNITRGSVRIEKNNELCYLATIDWSRILDSVEDNYIVLNKDDNE
d375502056f1 Uploaded
devteam
parents:
diff changeset
34 ECGDICPGTAKGKTNCPATVINGQFVERCWTHSHCQKVCPTICKSHGCTAEGLCCHSECL
d375502056f1 Uploaded
devteam
parents:
diff changeset
35 GNCSQPDDPTKCVACRNFYLDGRCVETCPPPYYHFQDWRCVNFSFCQDLHHKCKNSRRQG
d375502056f1 Uploaded
devteam
parents:
diff changeset
36 CHQYVIHNNKCIPECPSGYTMNSSNLLCTPCLGPCPKVCHLLEGEKTIDSVTSAQELRGC
d375502056f1 Uploaded
devteam
parents:
diff changeset
37 TVINGSLIINIRGGNNLAAELEANLGLIEEISGYLKIRRSYALVSLSFFRKLRLIRGETL
d375502056f1 Uploaded
devteam
parents:
diff changeset
38 EIGNYSFYALDNQNLRQLWDWSKHNLTITQGKLFFHYNPKLCLSEIHKMEEVSGTKGRQE
d375502056f1 Uploaded
devteam
parents:
diff changeset
39 RNDIALKTNGDQASCENELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQ
d375502056f1 Uploaded
devteam
parents:
diff changeset
40 NVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFS
d375502056f1 Uploaded
devteam
parents:
diff changeset
41 DERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWE
d375502056f1 Uploaded
devteam
parents:
diff changeset
42 RQAEDSELFELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQIL
d375502056f1 Uploaded
devteam
parents:
diff changeset
43 KELEESSFRKTFEDYLHNVVFVPRKTSSGTGAEDPRPSRKRRSLGDVGNVTVAVPTVAAF
d375502056f1 Uploaded
devteam
parents:
diff changeset
44 PNTSSTSVPTSPEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYV
d375502056f1 Uploaded
devteam
parents:
diff changeset
45 SARTMPEAKADDIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCV
d375502056f1 Uploaded
devteam
parents:
diff changeset
46 SRKHFALERGCRLRGLSPGNYSVRIRATSLAGNGSWTEPTYFYVTDYLDVPSNIAKIIIG
d375502056f1 Uploaded
devteam
parents:
diff changeset
47 PLIFVFLFSVVIGSIYLFLRKRQPDGPLGPLYASSNPEYLSASDVFPCSVYVPDEWEVSR
d375502056f1 Uploaded
devteam
parents:
diff changeset
48 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG
d375502056f1 Uploaded
devteam
parents:
diff changeset
49 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA
d375502056f1 Uploaded
devteam
parents:
diff changeset
50 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV
d375502056f1 Uploaded
devteam
parents:
diff changeset
51 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN
d375502056f1 Uploaded
devteam
parents:
diff changeset
52 CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSFFHSEENKAPESEELEME
d375502056f1 Uploaded
devteam
parents:
diff changeset
53 FEDMENVPLDRSSHCQREEAGGRDGGSSLGFKRSYEEHIPYTHMNGGKKNGRILTLPRSN
d375502056f1 Uploaded
devteam
parents:
diff changeset
54 PS
d375502056f1 Uploaded
devteam
parents:
diff changeset
55 >sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
d375502056f1 Uploaded
devteam
parents:
diff changeset
56 MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY
d375502056f1 Uploaded
devteam
parents:
diff changeset
57 VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG
d375502056f1 Uploaded
devteam
parents:
diff changeset
58 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP
d375502056f1 Uploaded
devteam
parents:
diff changeset
59 EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES
d375502056f1 Uploaded
devteam
parents:
diff changeset
60 ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI
d375502056f1 Uploaded
devteam
parents:
diff changeset
61 YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA