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comparison test-data/blastn_rhodopsin_vs_three_human.xml @ 18:577d9c12411a draft

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v0.1.06, now using BLAST+ 2.2.31
author peterjc
date Mon, 07 Sep 2015 04:44:24 -0400
parents c16c30e9ad5b
children 7538e2bfcd41
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17:697f40151eaf 18:577d9c12411a
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd"> 2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
3 <BlastOutput> 3 <BlastOutput>
4 <BlastOutput_program>blastn</BlastOutput_program> 4 <BlastOutput_program>blastn</BlastOutput_program>
5 <BlastOutput_version>BLASTN 2.2.30+</BlastOutput_version> 5 <BlastOutput_version>BLASTN 2.2.31+</BlastOutput_version>
6 <BlastOutput_reference>Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), &quot;A greedy algorithm for aligning DNA sequences&quot;, J Comput Biol 2000; 7(1-2):203-14.</BlastOutput_reference> 6 <BlastOutput_reference>Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), &quot;A greedy algorithm for aligning DNA sequences&quot;, J Comput Biol 2000; 7(1-2):203-14.</BlastOutput_reference>
7 <BlastOutput_db></BlastOutput_db> 7 <BlastOutput_db></BlastOutput_db>
8 <BlastOutput_query-ID>Query_1</BlastOutput_query-ID> 8 <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
9 <BlastOutput_query-def>gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA</BlastOutput_query-def> 9 <BlastOutput_query-def>gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA</BlastOutput_query-def>
10 <BlastOutput_query-len>1047</BlastOutput_query-len> 10 <BlastOutput_query-len>1047</BlastOutput_query-len>