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comparison tools/ncbi_blast_plus/ncbi_makeprofiledb.xml @ 25:e25d3acf6e68 draft

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v0.3.1 completed gzip support
author peterjc
date Tue, 23 Oct 2018 08:48:19 -0400
parents 6f386c5dc4fb
children 2889433c7ae1
comparison
equal deleted inserted replaced
24:c877294f8025 25:e25d3acf6e68
88 <param name="input_file" value="cd00003.smp,cd00008.smp" ftype="pssm-asn1" /> 88 <param name="input_file" value="cd00003.smp,cd00008.smp" ftype="pssm-asn1" />
89 <param name="title" value="Just 2 PSSM matrices" /> 89 <param name="title" value="Just 2 PSSM matrices" />
90 <param name="contain_pssm_scores_type" value="yes" /> 90 <param name="contain_pssm_scores_type" value="yes" />
91 <output name="outfile" file="empty_file.dat" ftype="blastdbd" > 91 <output name="outfile" file="empty_file.dat" ftype="blastdbd" >
92 <extra_files type="file" value="cd00003_and_cd00008.phr" name="blastdb.phr" /> 92 <extra_files type="file" value="cd00003_and_cd00008.phr" name="blastdb.phr" />
93 <extra_files type="file" value="cd00003_and_cd00008.pin" name="blastdb.pin" lines_diff="2" /> 93 <extra_files type="file" value="cd00003_and_cd00008.pin" name="blastdb.pin" compare="sim_size" delta="0" />
94 <extra_files type="file" value="cd00003_and_cd00008.psq" name="blastdb.psq" /> 94 <extra_files type="file" value="cd00003_and_cd00008.psq" name="blastdb.psq" />
95 <extra_files type="file" value="cd00003_and_cd00008.freq" name="blastdb.freq" /> 95 <extra_files type="file" value="cd00003_and_cd00008.freq" name="blastdb.freq" />
96 <extra_files type="file" value="cd00003_and_cd00008.loo" name="blastdb.loo" /> 96 <extra_files type="file" value="cd00003_and_cd00008.loo" name="blastdb.loo" />
97 <extra_files type="file" value="cd00003_and_cd00008.psd" name="blastdb.psd" /> 97 <extra_files type="file" value="cd00003_and_cd00008.psd" name="blastdb.psd" />
98 <extra_files type="file" value="cd00003_and_cd00008.psi" name="blastdb.psi" /> 98 <extra_files type="file" value="cd00003_and_cd00008.psi" name="blastdb.psi" />