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diff tools/ncbi_blast_plus/blastxml_to_tabular.py @ 23:31e517610e1f draft

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v0.3.0 Updated for NCBI BLAST+ 2.7.1
author peterjc
date Sat, 30 Jun 2018 17:22:46 -0400
parents 6f386c5dc4fb
children c877294f8025
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--- a/tools/ncbi_blast_plus/blastxml_to_tabular.py	Mon Sep 18 06:21:27 2017 -0400
+++ b/tools/ncbi_blast_plus/blastxml_to_tabular.py	Sat Jun 30 17:22:46 2018 -0400
@@ -108,6 +108,9 @@
 The columns option can be 'std' (standard 12 columns), 'ext'
 (extended 25 columns), or a list of BLAST+ column names like
 'qseqid,sseqid,pident' (space or comma separated).
+
+Note if using a list of column names, currently ONLY the 25
+extended column names are supported.
 """
 parser = OptionParser(usage=usage)
 parser.add_option('-o', '--output', dest='output', default=None,