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Thu, 22 Feb 2024 14:47:01 +0000 peterjc planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/ncbi_blast_plus commit 028e3e806ba6df913403a2a083a354dfa713755f draft
Sun, 19 Nov 2023 22:57:39 +0000 peterjc Fix for get_species_taxids draft
Thu, 26 Oct 2023 12:25:07 +0000 peterjc Update for NCBI BLAST+ 2.14.1 draft
Tue, 07 Jun 2022 12:15:44 +0000 peterjc Update with window size fix draft
Tue, 29 Mar 2022 14:54:02 +0000 peterjc "2.10.1+galaxy1 with taxid improvements" draft
Thu, 10 Sep 2020 13:23:34 +0000 peterjc "Updated to 2.10.1+galaxy0" draft
Thu, 10 Sep 2020 10:35:28 +0000 peterjc "Updated to 2.9.0+galaxy0" draft
Wed, 09 Sep 2020 15:32:17 +0000 peterjc "planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/ncbi_blast_plus commit 3f9f39ad808325a11d9967980d2cb82c96d69324" draft
Sat, 20 Jul 2019 18:36:36 -0400 peterjc v0.3.3 - fixed legacy dependecy definition draft
Tue, 23 Oct 2018 08:48:19 -0400 peterjc v0.3.1 completed gzip support draft
Mon, 09 Jul 2018 10:08:16 -0400 peterjc Fixed tool_dependencies.xml draft
Sat, 30 Jun 2018 17:22:46 -0400 peterjc v0.3.0 Updated for NCBI BLAST+ 2.7.1 draft
Mon, 18 Sep 2017 06:21:27 -0400 peterjc v0.2.01 add -max_hsps, -use_sw_tback; lists args; internal updates draft
Wed, 19 Apr 2017 05:27:19 -0400 peterjc v0.2.00, for NCBI BLAST+ 2.5.0 via bioconda or tool_dependencies.xml draft
Mon, 07 Nov 2016 11:31:37 -0500 peterjc Uploaded v0.1.08, can search multiple local databases, fixes a pipe problem in blastdbcmd, and minor internal changes. draft
Thu, 19 Nov 2015 06:30:35 -0500 peterjc v0.1.07 - fix macro problem in blastxml_to_tabular.xml, reenable .loc tests draft
Mon, 07 Sep 2015 04:44:24 -0400 peterjc v0.1.06, now using BLAST+ 2.2.31 draft
Fri, 04 Sep 2015 09:45:57 -0400 peterjc v0.1.05 - Update citation information now GigaScience paper is out draft
Wed, 22 Jul 2015 05:01:11 -0400 peterjc Uploaded v0.1.04, fix regression with BLAST database from history draft
Sun, 05 Jul 2015 10:37:27 -0400 peterjc Uploaded v0.1.03 (internal changes); v0.1.02 (BLAST+ 2.2.30 etc) draft
Mon, 01 Dec 2014 05:59:16 -0500 peterjc Uploaded v0.1.01 - Requires blastdbd datatype (blast_datatypes v0.0.19). Support for makeprofiledb to create protein domain databases and use them in RPS-BLAST and RPS-TBLASTN. Tools now support GI and SeqID filters, and embed the citations. draft
Fri, 14 Mar 2014 07:40:46 -0400 peterjc Uploaded v0.1.00, uses BLAST+ 2.2.29, allows custom column selection for tabular output - including taxonomy fields. draft
Tue, 21 Jan 2014 13:37:01 -0500 peterjc Re-uploaded v0.0.22, in order to update the blast_datatypes dependency draft
Thu, 05 Dec 2013 06:55:59 -0500 peterjc Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25. draft
Mon, 23 Sep 2013 06:14:13 -0400 peterjc Uploaded v0.0.20, handles dependencies via package_blast_plus_2_2_26, development moved to GitHub, RST README, MIT licence, citation information, more tests, percentage identity option to BLASTN, cElementTree to ElementTree fallback. draft
Thu, 25 Apr 2013 09:38:37 -0400 peterjc Uploaded v0.0.19, adds wrappers for rpsblast and rpstblastn with new blastdb_d.loc file for their protein domain database. draft
Tue, 19 Feb 2013 12:49:43 -0500 peterjc Uploaded v0.0.17, default to extended 24 column tabular output (rather than standard 12 column output). This should avoid many cases of repeated BLAST jobs being run due to later needing the extra columns. draft
Fri, 08 Feb 2013 05:51:26 -0500 peterjc Uploaded v0.0.16, declares explicit dependency on the 'blast_datatypes' repository. draft
Thu, 24 Jan 2013 12:40:41 -0500 peterjc Uploaded v0.0.15, clearer warning about searching against a FASTA file. draft
Fri, 09 Nov 2012 06:53:55 -0500 peterjc Uploaded v0.0.14 adding local BLAST database support. draft
Wed, 19 Sep 2012 13:08:31 -0400 peterjc Uploaded v0.0.13 which uses the recently added error handling. No longer bundles the hide_stderr.py script which is now redundant. draft
Thu, 23 Aug 2012 09:00:40 -0400 peterjc Uploaded v0.0.12b, same code but moving folders around to match all my other tools and make future development simpler. draft
Thu, 23 Aug 2012 07:32:06 -0400 peterjc Uploaded v0.0.12 again, without extra path draft
Thu, 23 Aug 2012 07:24:38 -0400 peterjc Uploaded v0.0.12 of the NCBI BLAST+ wrappers. draft
Fri, 17 Aug 2012 09:11:43 -0400 devteam Uploaded draft
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