Mercurial > repos > devteam > package_fastx_toolkit_0_0_13
changeset 0:93c0e1d68dbd draft
Uploaded tool dependency definition.
author | devteam |
---|---|
date | Wed, 25 Sep 2013 10:30:47 -0400 |
parents | |
children | ec66ae4c269b |
files | tool_dependencies.xml |
diffstat | 1 files changed, 62 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Wed Sep 25 10:30:47 2013 -0400 @@ -0,0 +1,62 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="fastx_toolkit" version="0.0.13"> + <install version="1.0"> + <actions_group> + <actions os="linux" architecture="x86_64"> + <action type="download_by_url">http://depot.galaxyproject.org/package/linux/x86_64/fastx_toolkit/0.0.13.tar.bz2</action> + <action type="move_directory_files"> + <source_directory>./bin</source_directory> + <destination_directory>$INSTALL_DIR/bin</destination_directory> + </action> + </actions> + <actions os="linux" architecture="i386"> + <action type="download_by_url">http://depot.galaxyproject.org/package/linux/i386/fastx_toolkit/0.0.13.tar.bz2</action> + <action type="move_directory_files"> + <source_directory>./bin</source_directory> + <destination_directory>$INSTALL_DIR/bin</destination_directory> + </action> + </actions> + <actions os="linux" architecture="i686"> + <action type="download_by_url">http://depot.galaxyproject.org/package/linux/i386/fastx_toolkit/0.0.13.tar.bz2</action> + <action type="move_directory_files"> + <source_directory>./bin</source_directory> + <destination_directory>$INSTALL_DIR/bin</destination_directory> + </action> + </actions> + <actions os="darwin" architecture="i386"> + <action type="download_by_url">http://depot.galaxyproject.org/package/darwin/i386/fastx_toolkit/0.0.13.tar.bz2</action> + <action type="move_directory_files"> + <source_directory>./bin</source_directory> + <destination_directory>$INSTALL_DIR/bin</destination_directory> + </action> + </actions> + <actions os="darwin" architecture="x86_64"> + <action type="download_by_url">http://depot.galaxyproject.org/package/darwin/x86_64/fastx_toolkit/0.0.13.tar.bz2</action> + <action type="move_directory_files"> + <source_directory>./bin</source_directory> + <destination_directory>$INSTALL_DIR/bin</destination_directory> + </action> + </actions> + <actions> + <package name="libgtextutils" version="0.6"> + <repository name="package_libgtextutils_0_6" owner="devteam" prior_installation_required="True" /> + </package> + <action type="download_by_url">http://depot.galaxyproject.org/package/source/fastx_toolkit/fastx_toolkit-0.0.13.tar.bz2</action> + <action type="set_environment_for_install"> + <repository name="package_libgtextutils_0_6" owner="devteam" prior_installation_required="True"> + <package name="libgtextutils" version="0.6" /> + </repository> + </action> + <action type="shell_command">./configure --prefix=$INSTALL_DIR --disable-wall</action> + <action type="shell_command">make && make install</action> + </actions> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> + </action> + </actions_group> + </install> + <readme> + </readme> + </package> +</tool_dependency>