Mercurial > repos > devteam > package_picard_1_56_0
changeset 2:99a28567c3a3 draft default tip
Uploaded correct tool dependency definition.
| author | devteam |
|---|---|
| date | Tue, 11 Nov 2014 15:19:25 -0500 |
| parents | 4a49481f29e7 |
| children | |
| files | tool_dependencies.xml |
| diffstat | 1 files changed, 10 insertions(+), 13 deletions(-) [+] |
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--- a/tool_dependencies.xml Thu Oct 23 10:51:08 2014 -0400 +++ b/tool_dependencies.xml Tue Nov 11 15:19:25 2014 -0500 @@ -1,22 +1,19 @@ <?xml version="1.0"?> <tool_dependency> - <package name="picard" version="1.122.0"> + <package name="picard" version="1.56.0"> <install version="1.0"> - <actions_group> - <actions architecture="x86_64" os="linux"> - <action type="download_by_url">https://github.com/broadinstitute/picard/releases/download/1.122/picard-tools-1.122.zip</action> - <action type="move_directory_files"> - <source_directory>.</source_directory> - <destination_directory>$INSTALL_DIR</destination_directory> - </action> - </actions> + <actions> + <action type="download_by_url">http://downloads.sourceforge.net/project/picard/picard-tools/1.56/picard-tools-1.56.zip</action> + <action type="move_directory_files"> + <source_directory>picard-tools-1.56</source_directory> + <destination_directory>$INSTALL_DIR/jars</destination_directory> + </action> <action type="set_environment"> - <environment_variable name="JAVA_JAR_PATH" action="set_to">$INSTALL_DIR</environment_variable> + <environment_variable name="JAVA_JAR_PATH" action="set_to">$INSTALL_DIR/jars</environment_variable> </action> - </actions_group> + </actions> </install> <readme> -This picard package dependency is retrieved directly from https://github.com/broadinstitute/picard/releases </readme> </package> -</tool_dependency> +</tool_dependency> \ No newline at end of file