Mercurial > repos > devteam > picard

annotate test-data/picard_QualityScoreDistribution_test1.tab @ 5:3d4f1fa26f0e draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author devteam
date Tue, 16 Dec 2014 19:03:21 -0500
parents
children 5053a18d9bc8
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
5
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
1 ## htsjdk.samtools.metrics.StringHeader
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
2 # picard.analysis.QualityScoreDistribution CHART_OUTPUT=/Users/anton/galaxy-central/database/files/000/dataset_968.dat ALIGNED_READS_ONLY=false PF_READS_ONLY=false INCLUDE_NO_CALLS=false INPUT=/Users/anton/galaxy-central/database/files/000/dataset_966.dat OUTPUT=/Users/anton/galaxy-central/database/files/000/dataset_967.dat REFERENCE_SEQUENCE=localref.fa ASSUME_SORTED=true VERBOSITY=ERROR QUIET=true VALIDATION_STRINGENCY=LENIENT STOP_AFTER=0 COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
3 ## htsjdk.samtools.metrics.StringHeader
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
4 # Started on: Wed Oct 15 14:31:45 EDT 2014
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
5
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
6
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
7 ## HISTOGRAM java.lang.Byte
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
8 QUALITY COUNT_OF_Q
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
9 6 704
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
10 7 2044
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
11 8 745
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
12 9 2761
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
13 10 1193
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
14 11 723
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
15 12 1766
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
16 13 1467
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
17 14 1400
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
18 15 1463
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
19 16 478
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
20 17 831
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
21 18 330
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
22 19 904
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
23 20 1538
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
24 21 2953
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
25 22 565
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
26 23 4270
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
27 24 1496
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
28 25 5178
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
29 26 3992
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
30 27 3779
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
31 28 3074
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
32 29 2909
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
33 30 19446
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
34 31 3520
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
35 32 13368
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
36 33 9203
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
37 34 22271
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
38 35 24655
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
39 36 64306
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
40 37 38212
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
41 38 95777
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
42 39 67370
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
43 40 36926
3d4f1fa26f0e Uploaded
devteam
parents:
diff changeset
44