Mercurial > repos > devteam > picard
comparison picard_CollectRnaSeqMetrics.xml @ 8:3a3234d7a2e8 draft
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit 00a7926c285bc4a339bd7deebf40b28f39c7d947-dirty
| author | devteam |
|---|---|
| date | Thu, 16 Jul 2015 15:53:10 -0400 |
| parents | 3d4f1fa26f0e |
| children | 5eaa8a968300 |
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| 7:379fdf4c41ac | 8:3a3234d7a2e8 |
|---|---|
| 1 <tool name="CollectRnaSeqMetrics" id="picard_CollectRnaSeqMetrics" version="1.126.0"> | 1 <tool name="CollectRnaSeqMetrics" id="picard_CollectRnaSeqMetrics" version="@TOOL_VERSION@.0"> |
| 2 <description> collect metrics about the alignment of RNA to various functional classes of loci in the genome</description> | 2 <description> collect metrics about the alignment of RNA to various functional classes of loci in the genome</description> |
| 3 <requirements> | 3 <macros> |
| 4 <requirement type="package" version="1.126.0">picard</requirement> | 4 <import>picard_macros.xml</import> |
| 5 </requirements> | 5 </macros> |
| 6 | 6 <expand macro="requirements"> |
| 7 <macros> | 7 <requirement type="package" version="3.1.2">R</requirement> |
| 8 <import>picard_macros.xml</import> | 8 </expand> |
| 9 </macros> | 9 <command> |
| 10 | 10 |
| 11 | |
| 12 <command> | |
| 13 | |
| 14 ## Set up input files | 11 ## Set up input files |
| 15 | 12 |
| 16 ## Reference sequences | 13 ## Reference sequences |
| 17 | 14 |
| 18 #set $reference_fasta_filename = "localref.fa" | 15 #set $reference_fasta_filename = "localref.fa" |